Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN12P56749 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN12P56749 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLDN12P56749 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN12P56749 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN12P56749 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN12P56749 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN12P56749 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN12P56749 LINC00896-202ENST00000609602 2128 ntBASIC16.25■□□□□ 0.19
CLDN12P56749 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN12P56749 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN12P56749 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
CLDN12P56749 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN12P56749 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLDN12P56749 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN12P56749 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CLDN12P56749 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN12P56749 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN12P56749 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
CLDN12P56749 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN12P56749 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN12P56749 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN12P56749 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN12P56749 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN12P56749 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN12P56749 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN12P56749 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CLDN12P56749 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN12P56749 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN12P56749 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CLDN12P56749 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN12P56749 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLDN12P56749 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN12P56749 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN12P56749 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CLDN12P56749 MIPEPP3-201ENST00000412105 444 ntBASIC16.24■□□□□ 0.19
CLDN12P56749 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN12P56749 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN12P56749 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN12P56749 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CLDN12P56749 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLDN12P56749 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN12P56749 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 AC092368.3-202ENST00000574180 1591 ntBASIC16.24■□□□□ 0.19
CLDN12P56749 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CLDN12P56749 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CLDN12P56749 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
CLDN12P56749 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CLDN12P56749 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN12P56749 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN12P56749 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN12P56749 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN12P56749 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CLDN12P56749 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLDN12P56749 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN12P56749 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN12P56749 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CLDN12P56749 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLDN12P56749 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN12P56749 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN12P56749 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
CLDN12P56749 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN12P56749 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN12P56749 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLDN12P56749 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLDN12P56749 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLDN12P56749 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN12P56749 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN12P56749 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.23■□□□□ 0.19
CLDN12P56749 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN12P56749 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN12P56749 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms