Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.93□□□□□ -0.18
CMC4P56277 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.93□□□□□ -0.18
CMC4P56277 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.93□□□□□ -0.18
CMC4P56277 MIR3180-4-201ENST00000582223 153 ntBASIC13.93□□□□□ -0.18
CMC4P56277 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.93□□□□□ -0.18
CMC4P56277 CR769767.2-201ENST00000622735 460 ntBASIC13.93□□□□□ -0.18
CMC4P56277 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.93□□□□□ -0.18
CMC4P56277 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
CMC4P56277 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CMC4P56277 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CMC4P56277 GPAT2P1-201ENST00000444924 1672 ntBASIC13.93□□□□□ -0.18
CMC4P56277 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
CMC4P56277 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC13.93□□□□□ -0.18
CMC4P56277 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CMC4P56277 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CMC4P56277 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.93□□□□□ -0.18
CMC4P56277 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CMC4P56277 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
CMC4P56277 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 HOXB1-202ENST00000577092 1414 ntBASIC13.92□□□□□ -0.18
CMC4P56277 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CMC4P56277 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.92□□□□□ -0.18
CMC4P56277 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CMC4P56277 COX11P1-201ENST00000489116 835 ntBASIC13.92□□□□□ -0.18
CMC4P56277 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.92□□□□□ -0.18
CMC4P56277 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.92□□□□□ -0.18
CMC4P56277 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.92□□□□□ -0.18
CMC4P56277 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.92□□□□□ -0.18
CMC4P56277 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CMC4P56277 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CMC4P56277 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.92□□□□□ -0.18
CMC4P56277 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMC4P56277 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.92□□□□□ -0.18
CMC4P56277 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
CMC4P56277 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CMC4P56277 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC13.91□□□□□ -0.18
CMC4P56277 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.91□□□□□ -0.18
CMC4P56277 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
CMC4P56277 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.91□□□□□ -0.18
CMC4P56277 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.91□□□□□ -0.18
CMC4P56277 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.91□□□□□ -0.18
CMC4P56277 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.91□□□□□ -0.18
CMC4P56277 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CMC4P56277 AC034232.1-201ENST00000506026 1064 ntBASIC13.91□□□□□ -0.18
CMC4P56277 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.91□□□□□ -0.18
CMC4P56277 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.91□□□□□ -0.18
CMC4P56277 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.91□□□□□ -0.18
CMC4P56277 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.91□□□□□ -0.18
CMC4P56277 AC112497.1-201ENST00000624824 639 ntBASIC13.91□□□□□ -0.18
CMC4P56277 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CMC4P56277 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CMC4P56277 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.91□□□□□ -0.18
CMC4P56277 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.91□□□□□ -0.18
CMC4P56277 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CMC4P56277 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMC4P56277 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.9□□□□□ -0.18
CMC4P56277 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms