Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SUMO3P55854 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SUMO3P55854 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SUMO3P55854 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SUMO3P55854 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SUMO3P55854 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SUMO3P55854 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SUMO3P55854 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SUMO3P55854 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SUMO3P55854 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.9■□□□□ 0.3
SUMO3P55854 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.9■□□□□ 0.3
SUMO3P55854 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SUMO3P55854 AC004408.2-201ENST00000623613 2777 ntBASIC16.9■□□□□ 0.3
SUMO3P55854 MYLKP1-201ENST00000509077 1580 ntBASIC16.9■□□□□ 0.3
SUMO3P55854 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SUMO3P55854 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SUMO3P55854 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SUMO3P55854 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SUMO3P55854 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SUMO3P55854 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SUMO3P55854 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
SUMO3P55854 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
SUMO3P55854 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SUMO3P55854 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SUMO3P55854 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.9■□□□□ 0.3
SUMO3P55854 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.9■□□□□ 0.3
SUMO3P55854 AC009947.2-201ENST00000444014 672 ntBASIC16.9■□□□□ 0.3
SUMO3P55854 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.9■□□□□ 0.3
SUMO3P55854 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SUMO3P55854 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.9■□□□□ 0.3
SUMO3P55854 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SUMO3P55854 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.9■□□□□ 0.3
SUMO3P55854 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SUMO3P55854 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.9■□□□□ 0.3
SUMO3P55854 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.9■□□□□ 0.3
SUMO3P55854 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SUMO3P55854 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SUMO3P55854 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.9■□□□□ 0.3
SUMO3P55854 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SUMO3P55854 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SUMO3P55854 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.89■□□□□ 0.3
SUMO3P55854 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.89■□□□□ 0.3
SUMO3P55854 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SUMO3P55854 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SUMO3P55854 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
SUMO3P55854 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 AC073592.3-201ENST00000625118 1834 ntBASIC16.89■□□□□ 0.29
SUMO3P55854 KRT8P50-201ENST00000562022 1438 ntBASIC16.89■□□□□ 0.29
SUMO3P55854 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.89■□□□□ 0.29
SUMO3P55854 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.89■□□□□ 0.29
SUMO3P55854 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.89■□□□□ 0.29
SUMO3P55854 AC211429.1-201ENST00000415277 523 ntBASIC16.89■□□□□ 0.29
SUMO3P55854 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.89■□□□□ 0.29
SUMO3P55854 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.89■□□□□ 0.29
SUMO3P55854 ATP5G1P1-201ENST00000448724 379 ntBASIC16.89■□□□□ 0.29
SUMO3P55854 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.89■□□□□ 0.29
SUMO3P55854 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.89■□□□□ 0.29
SUMO3P55854 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.89■□□□□ 0.29
SUMO3P55854 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.89■□□□□ 0.29
SUMO3P55854 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.89■□□□□ 0.29
SUMO3P55854 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.89■□□□□ 0.29
SUMO3P55854 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.89■□□□□ 0.29
SUMO3P55854 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 AL138966.2-201ENST00000621997 464 ntBASIC16.89■□□□□ 0.29
SUMO3P55854 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SUMO3P55854 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SUMO3P55854 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SUMO3P55854 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SUMO3P55854 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.88■□□□□ 0.29
SUMO3P55854 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.88■□□□□ 0.29
SUMO3P55854 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SUMO3P55854 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.88■□□□□ 0.29
SUMO3P55854 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SUMO3P55854 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.88■□□□□ 0.29
SUMO3P55854 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.88■□□□□ 0.29
SUMO3P55854 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms