Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAD23BP54727 AL357033.4-201ENST00000617703 1807 ntBASIC19.95■□□□□ 0.78
RAD23BP54727 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAD23BP54727 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.95■□□□□ 0.78
RAD23BP54727 ECEL1P3-201ENST00000427961 737 ntBASIC19.95■□□□□ 0.78
RAD23BP54727 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.95■□□□□ 0.78
RAD23BP54727 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.95■□□□□ 0.78
RAD23BP54727 CR769767.2-201ENST00000622735 460 ntBASIC19.95■□□□□ 0.78
RAD23BP54727 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RAD23BP54727 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAD23BP54727 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.95■□□□□ 0.78
RAD23BP54727 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.95■□□□□ 0.78
RAD23BP54727 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAD23BP54727 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.95■□□□□ 0.78
RAD23BP54727 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAD23BP54727 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAD23BP54727 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAD23BP54727 NEFHP1-201ENST00000412845 2629 ntBASIC19.94■□□□□ 0.78
RAD23BP54727 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.94■□□□□ 0.78
RAD23BP54727 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAD23BP54727 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RAD23BP54727 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.94■□□□□ 0.78
RAD23BP54727 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.94■□□□□ 0.78
RAD23BP54727 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.94■□□□□ 0.78
RAD23BP54727 SLC25A3P1-201ENST00000443844 931 ntBASIC19.94■□□□□ 0.78
RAD23BP54727 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.94■□□□□ 0.78
RAD23BP54727 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.94■□□□□ 0.78
RAD23BP54727 MIR3180-5-201ENST00000583743 153 ntBASIC19.94■□□□□ 0.78
RAD23BP54727 LINC01023-201ENST00000606054 436 ntBASIC19.94■□□□□ 0.78
RAD23BP54727 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RAD23BP54727 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RAD23BP54727 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.94■□□□□ 0.78
RAD23BP54727 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAD23BP54727 AC036111.1-201ENST00000533973 1582 ntBASIC19.94■□□□□ 0.78
RAD23BP54727 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAD23BP54727 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAD23BP54727 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAD23BP54727 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAD23BP54727 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAD23BP54727 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAD23BP54727 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAD23BP54727 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAD23BP54727 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.93■□□□□ 0.78
RAD23BP54727 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.93■□□□□ 0.78
RAD23BP54727 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.93■□□□□ 0.78
RAD23BP54727 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAD23BP54727 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.93■□□□□ 0.78
RAD23BP54727 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.93■□□□□ 0.78
RAD23BP54727 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.93■□□□□ 0.78
RAD23BP54727 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAD23BP54727 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.93■□□□□ 0.78
RAD23BP54727 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAD23BP54727 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.93■□□□□ 0.78
RAD23BP54727 WWOX-216ENST00000569818 525 ntBASIC19.93■□□□□ 0.78
RAD23BP54727 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAD23BP54727 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAD23BP54727 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RAD23BP54727 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAD23BP54727 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAD23BP54727 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RAD23BP54727 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.93■□□□□ 0.78
RAD23BP54727 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAD23BP54727 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.93■□□□□ 0.78
RAD23BP54727 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAD23BP54727 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAD23BP54727 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAD23BP54727 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RAD23BP54727 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
RAD23BP54727 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAD23BP54727 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RAD23BP54727 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
RAD23BP54727 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAD23BP54727 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.92■□□□□ 0.78
RAD23BP54727 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAD23BP54727 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAD23BP54727 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAD23BP54727 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.92■□□□□ 0.78
RAD23BP54727 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RAD23BP54727 MIR564-202ENST00000385049 94 ntBASIC19.92■□□□□ 0.78
RAD23BP54727 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.92■□□□□ 0.78
RAD23BP54727 AC010203.1-204ENST00000548782 407 ntBASIC19.92■□□□□ 0.78
RAD23BP54727 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.92■□□□□ 0.78
RAD23BP54727 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.92■□□□□ 0.78
RAD23BP54727 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.92■□□□□ 0.78
RAD23BP54727 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.92■□□□□ 0.78
RAD23BP54727 Z98044.1-201ENST00000632503 1764 ntBASIC19.92■□□□□ 0.78
RAD23BP54727 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAD23BP54727 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAD23BP54727 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAD23BP54727 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAD23BP54727 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAD23BP54727 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAD23BP54727 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RAD23BP54727 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
RAD23BP54727 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
RAD23BP54727 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAD23BP54727 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAD23BP54727 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.91■□□□□ 0.78
RAD23BP54727 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAD23BP54727 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms