Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SRP9P49458 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SRP9P49458 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.58■□□□□ 0.24
SRP9P49458 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRP9P49458 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.58■□□□□ 0.24
SRP9P49458 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.58■□□□□ 0.24
SRP9P49458 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.58■□□□□ 0.24
SRP9P49458 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.58■□□□□ 0.24
SRP9P49458 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SRP9P49458 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRP9P49458 KRT8P8-201ENST00000434750 1448 ntBASIC16.58■□□□□ 0.24
SRP9P49458 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRP9P49458 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.58■□□□□ 0.24
SRP9P49458 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SRP9P49458 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.58■□□□□ 0.24
SRP9P49458 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRP9P49458 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRP9P49458 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRP9P49458 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.58■□□□□ 0.24
SRP9P49458 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRP9P49458 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.58■□□□□ 0.24
SRP9P49458 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.58■□□□□ 0.24
SRP9P49458 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.58■□□□□ 0.24
SRP9P49458 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRP9P49458 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
SRP9P49458 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRP9P49458 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.58■□□□□ 0.24
SRP9P49458 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRP9P49458 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
SRP9P49458 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.57■□□□□ 0.24
SRP9P49458 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SRP9P49458 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.57■□□□□ 0.24
SRP9P49458 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SRP9P49458 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SRP9P49458 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.57■□□□□ 0.24
SRP9P49458 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 AL135905.2-201ENST00000584934 1404 ntBASIC16.57■□□□□ 0.24
SRP9P49458 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 AL353807.1-201ENST00000427475 662 ntBASIC16.57■□□□□ 0.24
SRP9P49458 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SRP9P49458 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.57■□□□□ 0.24
SRP9P49458 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.57■□□□□ 0.24
SRP9P49458 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.57■□□□□ 0.24
SRP9P49458 AP006294.2-201ENST00000641667 209 ntBASIC16.57■□□□□ 0.24
SRP9P49458 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.57■□□□□ 0.24
SRP9P49458 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SRP9P49458 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SRP9P49458 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.56■□□□□ 0.24
SRP9P49458 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.56■□□□□ 0.24
SRP9P49458 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SRP9P49458 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SRP9P49458 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SRP9P49458 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SRP9P49458 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.56■□□□□ 0.24
SRP9P49458 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SRP9P49458 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SRP9P49458 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SRP9P49458 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SRP9P49458 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.56■□□□□ 0.24
SRP9P49458 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.56■□□□□ 0.24
SRP9P49458 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SRP9P49458 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.56■□□□□ 0.24
SRP9P49458 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SRP9P49458 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.56■□□□□ 0.24
SRP9P49458 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SRP9P49458 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SRP9P49458 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.56■□□□□ 0.24
SRP9P49458 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.56■□□□□ 0.24
SRP9P49458 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SRP9P49458 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.56■□□□□ 0.24
SRP9P49458 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SRP9P49458 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.56■□□□□ 0.24
SRP9P49458 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.56■□□□□ 0.24
SRP9P49458 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.56■□□□□ 0.24
SRP9P49458 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.56■□□□□ 0.24
SRP9P49458 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SRP9P49458 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.56■□□□□ 0.24
SRP9P49458 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SRP9P49458 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.56■□□□□ 0.24
SRP9P49458 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
SRP9P49458 ABALON-201ENST00000629058 1903 ntBASIC16.56■□□□□ 0.24
SRP9P49458 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SRP9P49458 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms