Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CENPFP49454 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CENPFP49454 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CENPFP49454 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CENPFP49454 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.05■□□□□ 0.96
CENPFP49454 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CENPFP49454 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CENPFP49454 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CENPFP49454 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CENPFP49454 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.04■□□□□ 0.96
CENPFP49454 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.04■□□□□ 0.96
CENPFP49454 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.04■□□□□ 0.96
CENPFP49454 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.04■□□□□ 0.96
CENPFP49454 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.04■□□□□ 0.96
CENPFP49454 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 RN7SL606P-201ENST00000472779 293 ntBASIC21.04■□□□□ 0.96
CENPFP49454 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.04■□□□□ 0.96
CENPFP49454 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.04■□□□□ 0.96
CENPFP49454 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 AC099778.1-201ENST00000568593 1911 ntBASIC21.04■□□□□ 0.96
CENPFP49454 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.04■□□□□ 0.96
CENPFP49454 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.04■□□□□ 0.96
CENPFP49454 AC010240.3-201ENST00000607688 395 ntBASIC21.04■□□□□ 0.96
CENPFP49454 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CENPFP49454 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CENPFP49454 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CENPFP49454 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.03■□□□□ 0.96
CENPFP49454 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CENPFP49454 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.03■□□□□ 0.96
CENPFP49454 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CENPFP49454 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CENPFP49454 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.03■□□□□ 0.96
CENPFP49454 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CENPFP49454 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.03■□□□□ 0.96
CENPFP49454 YBX2P1-201ENST00000394192 760 ntBASIC21.03■□□□□ 0.96
CENPFP49454 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.03■□□□□ 0.96
CENPFP49454 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.03■□□□□ 0.96
CENPFP49454 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CENPFP49454 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CENPFP49454 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CENPFP49454 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CENPFP49454 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.03■□□□□ 0.96
CENPFP49454 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CENPFP49454 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CENPFP49454 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CENPFP49454 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.02■□□□□ 0.96
CENPFP49454 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CENPFP49454 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.02■□□□□ 0.96
CENPFP49454 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CENPFP49454 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
CENPFP49454 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.02■□□□□ 0.96
CENPFP49454 AL591424.1-201ENST00000442569 1213 ntBASIC21.02■□□□□ 0.96
CENPFP49454 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.02■□□□□ 0.96
CENPFP49454 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CENPFP49454 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.02■□□□□ 0.96
CENPFP49454 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.02■□□□□ 0.96
CENPFP49454 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.02■□□□□ 0.96
CENPFP49454 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CENPFP49454 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.02■□□□□ 0.96
CENPFP49454 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CENPFP49454 HOXB1-202ENST00000577092 1414 ntBASIC21.02■□□□□ 0.96
CENPFP49454 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CENPFP49454 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.02■□□□□ 0.95
CENPFP49454 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.02■□□□□ 0.95
CENPFP49454 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.02■□□□□ 0.95
CENPFP49454 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CENPFP49454 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CENPFP49454 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.02■□□□□ 0.95
CENPFP49454 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CENPFP49454 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CENPFP49454 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CENPFP49454 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CENPFP49454 ZNF259P1-201ENST00000407656 1365 ntBASIC21.01■□□□□ 0.95
CENPFP49454 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CENPFP49454 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CENPFP49454 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.01■□□□□ 0.95
CENPFP49454 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.01■□□□□ 0.95
CENPFP49454 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.01■□□□□ 0.95
CENPFP49454 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CENPFP49454 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.01■□□□□ 0.95
CENPFP49454 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CENPFP49454 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CENPFP49454 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CENPFP49454 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CENPFP49454 CYMP-203ENST00000474680 1263 ntBASIC21.01■□□□□ 0.95
CENPFP49454 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms