Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CEACAM3P40198 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CEACAM3P40198 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CEACAM3P40198 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.25■□□□□ 0.03
CEACAM3P40198 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.25■□□□□ 0.03
CEACAM3P40198 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CEACAM3P40198 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CEACAM3P40198 AC010947.1-201ENST00000623454 693 ntBASIC15.25■□□□□ 0.03
CEACAM3P40198 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.25■□□□□ 0.03
CEACAM3P40198 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.25■□□□□ 0.03
CEACAM3P40198 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CEACAM3P40198 AC018445.3-201ENST00000624177 1945 ntBASIC15.25■□□□□ 0.03
CEACAM3P40198 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CEACAM3P40198 AC092338.2-201ENST00000568827 1415 ntBASIC15.25■□□□□ 0.03
CEACAM3P40198 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.25■□□□□ 0.03
CEACAM3P40198 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 AC026471.1-201ENST00000564629 3026 ntBASIC15.25■□□□□ 0.03
CEACAM3P40198 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CEACAM3P40198 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CEACAM3P40198 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.24■□□□□ 0.03
CEACAM3P40198 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.24■□□□□ 0.03
CEACAM3P40198 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CEACAM3P40198 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CEACAM3P40198 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.24■□□□□ 0.03
CEACAM3P40198 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.24■□□□□ 0.03
CEACAM3P40198 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 AC007663.1-201ENST00000438948 1240 ntBASIC15.24■□□□□ 0.03
CEACAM3P40198 AP003041.3-201ENST00000527151 707 ntBASIC15.24■□□□□ 0.03
CEACAM3P40198 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.24■□□□□ 0.03
CEACAM3P40198 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.24■□□□□ 0.03
CEACAM3P40198 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.24■□□□□ 0.03
CEACAM3P40198 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.24■□□□□ 0.03
CEACAM3P40198 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.24■□□□□ 0.03
CEACAM3P40198 AC145285.6-201ENST00000604632 637 ntBASIC15.24■□□□□ 0.03
CEACAM3P40198 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CEACAM3P40198 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CEACAM3P40198 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.24■□□□□ 0.03
CEACAM3P40198 CYP2D8P-201ENST00000433633 1490 ntBASIC15.24■□□□□ 0.03
CEACAM3P40198 KRT8P32-201ENST00000512863 1461 ntBASIC15.24■□□□□ 0.03
CEACAM3P40198 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CEACAM3P40198 AL049812.1-201ENST00000432563 2267 ntBASIC15.24■□□□□ 0.03
CEACAM3P40198 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CEACAM3P40198 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CEACAM3P40198 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CEACAM3P40198 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.23■□□□□ 0.03
CEACAM3P40198 RCC2P3-201ENST00000418112 1537 ntBASIC15.23■□□□□ 0.03
CEACAM3P40198 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CEACAM3P40198 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.23■□□□□ 0.03
CEACAM3P40198 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 AL109659.2-201ENST00000606809 1674 ntBASIC15.23■□□□□ 0.03
CEACAM3P40198 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.23■□□□□ 0.03
CEACAM3P40198 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 HMGA1P5-201ENST00000412453 271 ntBASIC15.23■□□□□ 0.03
CEACAM3P40198 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
CEACAM3P40198 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.23■□□□□ 0.03
CEACAM3P40198 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.23■□□□□ 0.03
CEACAM3P40198 LINC01023-201ENST00000606054 436 ntBASIC15.23■□□□□ 0.03
CEACAM3P40198 AC133561.5-201ENST00000635547 218 ntBASIC15.23■□□□□ 0.03
CEACAM3P40198 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CEACAM3P40198 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.23■□□□□ 0.03
CEACAM3P40198 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.23■□□□□ 0.03
CEACAM3P40198 KRT8P9-201ENST00000558927 1449 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms