Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCLP35914 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.58■□□□□ 0.57
HMGCLP35914 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCLP35914 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCLP35914 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLP35914 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLP35914 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLP35914 AP000523.1-201ENST00000398242 1049 ntBASIC18.58■□□□□ 0.56
HMGCLP35914 ATP5G1P1-201ENST00000448724 379 ntBASIC18.58■□□□□ 0.56
HMGCLP35914 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLP35914 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.58■□□□□ 0.56
HMGCLP35914 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLP35914 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLP35914 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.58■□□□□ 0.56
HMGCLP35914 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HMGCLP35914 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
HMGCLP35914 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLP35914 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLP35914 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HMGCLP35914 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLP35914 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLP35914 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGCLP35914 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGCLP35914 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLP35914 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.58■□□□□ 0.56
HMGCLP35914 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
HMGCLP35914 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLP35914 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLP35914 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HMGCLP35914 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
HMGCLP35914 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HMGCLP35914 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.57■□□□□ 0.56
HMGCLP35914 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HMGCLP35914 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
HMGCLP35914 KRT18P23-201ENST00000435622 1283 ntBASIC18.57■□□□□ 0.56
HMGCLP35914 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLP35914 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.57■□□□□ 0.56
HMGCLP35914 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLP35914 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.57■□□□□ 0.56
HMGCLP35914 AC112497.1-201ENST00000624824 639 ntBASIC18.57■□□□□ 0.56
HMGCLP35914 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HMGCLP35914 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HMGCLP35914 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLP35914 WIZP1-201ENST00000531444 2299 ntBASIC18.57■□□□□ 0.56
HMGCLP35914 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HMGCLP35914 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLP35914 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLP35914 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLP35914 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLP35914 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLP35914 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGCLP35914 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCLP35914 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCLP35914 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.56■□□□□ 0.56
HMGCLP35914 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLP35914 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.56■□□□□ 0.56
HMGCLP35914 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGCLP35914 AC005521.1-201ENST00000393351 872 ntBASIC18.56■□□□□ 0.56
HMGCLP35914 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.56■□□□□ 0.56
HMGCLP35914 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.56■□□□□ 0.56
HMGCLP35914 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HMGCLP35914 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLP35914 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCLP35914 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGCLP35914 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLP35914 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
HMGCLP35914 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLP35914 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HMGCLP35914 KRT8P50-201ENST00000562022 1438 ntBASIC18.56■□□□□ 0.56
HMGCLP35914 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
HMGCLP35914 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLP35914 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCLP35914 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCLP35914 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLP35914 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCLP35914 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.55■□□□□ 0.56
HMGCLP35914 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCLP35914 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms