Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A4P31645 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC6A4P31645 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A4P31645 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC6A4P31645 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A4P31645 AC092597.1-201ENST00000487352 616 ntBASIC19.18■□□□□ 0.66
SLC6A4P31645 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC6A4P31645 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC6A4P31645 AC104390.1-201ENST00000555663 520 ntBASIC19.18■□□□□ 0.66
SLC6A4P31645 AL157888.1-201ENST00000631930 593 ntBASIC19.18■□□□□ 0.66
SLC6A4P31645 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A4P31645 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A4P31645 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A4P31645 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLC6A4P31645 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SLC6A4P31645 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC6A4P31645 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A4P31645 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC6A4P31645 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC6A4P31645 KRT8P7-201ENST00000533003 1432 ntBASIC19.17■□□□□ 0.66
SLC6A4P31645 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A4P31645 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A4P31645 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC6A4P31645 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A4P31645 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A4P31645 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A4P31645 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC6A4P31645 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A4P31645 MIR3917-201ENST00000580971 93 ntBASIC19.17■□□□□ 0.66
SLC6A4P31645 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC6A4P31645 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC6A4P31645 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SLC6A4P31645 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A4P31645 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC6A4P31645 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SLC6A4P31645 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A4P31645 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A4P31645 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.16■□□□□ 0.66
SLC6A4P31645 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A4P31645 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC6A4P31645 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A4P31645 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A4P31645 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A4P31645 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A4P31645 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A4P31645 SPDYE13P-201ENST00000445314 798 ntBASIC19.16■□□□□ 0.66
SLC6A4P31645 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC6A4P31645 AC034232.1-201ENST00000506026 1064 ntBASIC19.16■□□□□ 0.66
SLC6A4P31645 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A4P31645 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC6A4P31645 AC010240.3-201ENST00000607688 395 ntBASIC19.16■□□□□ 0.66
SLC6A4P31645 AC079602.3-201ENST00000623931 403 ntBASIC19.16■□□□□ 0.66
SLC6A4P31645 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A4P31645 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A4P31645 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A4P31645 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A4P31645 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLC6A4P31645 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A4P31645 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC6A4P31645 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
SLC6A4P31645 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SLC6A4P31645 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A4P31645 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A4P31645 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A4P31645 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A4P31645 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A4P31645 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC6A4P31645 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
SLC6A4P31645 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SLC6A4P31645 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A4P31645 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A4P31645 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC6A4P31645 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A4P31645 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC6A4P31645 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A4P31645 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A4P31645 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC6A4P31645 FAM86EP-206ENST00000510506 987 ntBASIC19.15■□□□□ 0.66
SLC6A4P31645 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC6A4P31645 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A4P31645 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A4P31645 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC6A4P31645 AL358472.4-201ENST00000633140 710 ntBASIC19.15■□□□□ 0.66
SLC6A4P31645 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SLC6A4P31645 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A4P31645 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
SLC6A4P31645 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A4P31645 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A4P31645 LINC01311-201ENST00000565162 1445 ntBASIC19.15■□□□□ 0.66
SLC6A4P31645 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A4P31645 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.15■□□□□ 0.66
SLC6A4P31645 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
SLC6A4P31645 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLC6A4P31645 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.14■□□□□ 0.66
SLC6A4P31645 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A4P31645 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SLC6A4P31645 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SLC6A4P31645 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A4P31645 HBZP1-201ENST00000354915 429 ntBASIC19.14■□□□□ 0.65
SLC6A4P31645 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms