Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL121956.5-201ENST00000625261 221 ntBASIC15.78■□□□□ 0.12
COL8A2P25067 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL8A2P25067 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
COL8A2P25067 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.78■□□□□ 0.12
COL8A2P25067 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
COL8A2P25067 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL8A2P25067 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
COL8A2P25067 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL8A2P25067 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.78■□□□□ 0.12
COL8A2P25067 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL8A2P25067 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL8A2P25067 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL8A2P25067 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.78■□□□□ 0.12
COL8A2P25067 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.77■□□□□ 0.12
COL8A2P25067 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
COL8A2P25067 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
COL8A2P25067 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
COL8A2P25067 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.77■□□□□ 0.12
COL8A2P25067 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.77■□□□□ 0.12
COL8A2P25067 AL109659.2-201ENST00000606809 1674 ntBASIC15.77■□□□□ 0.12
COL8A2P25067 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.77■□□□□ 0.12
COL8A2P25067 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL8A2P25067 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL8A2P25067 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL8A2P25067 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL8A2P25067 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL8A2P25067 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
COL8A2P25067 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL8A2P25067 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL8A2P25067 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.12
COL8A2P25067 SPDYE15P-201ENST00000424157 909 ntBASIC15.77■□□□□ 0.12
COL8A2P25067 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.77■□□□□ 0.12
COL8A2P25067 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.77■□□□□ 0.12
COL8A2P25067 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL8A2P25067 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
COL8A2P25067 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL8A2P25067 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.77■□□□□ 0.12
COL8A2P25067 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL8A2P25067 HYMAI.1-201ENST00000620949 238 ntBASIC15.77■□□□□ 0.12
COL8A2P25067 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
COL8A2P25067 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL8A2P25067 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL8A2P25067 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL8A2P25067 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL8A2P25067 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
COL8A2P25067 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL8A2P25067 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.77■□□□□ 0.11
COL8A2P25067 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.77■□□□□ 0.11
COL8A2P25067 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL8A2P25067 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL8A2P25067 KRT8P32-201ENST00000512863 1461 ntBASIC15.77■□□□□ 0.11
COL8A2P25067 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC15.77■□□□□ 0.11
COL8A2P25067 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL8A2P25067 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL8A2P25067 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL8A2P25067 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.76■□□□□ 0.11
COL8A2P25067 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.76■□□□□ 0.11
COL8A2P25067 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
COL8A2P25067 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.76■□□□□ 0.11
COL8A2P25067 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.76■□□□□ 0.11
COL8A2P25067 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.76■□□□□ 0.11
COL8A2P25067 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
COL8A2P25067 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
COL8A2P25067 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.76■□□□□ 0.11
COL8A2P25067 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
COL8A2P25067 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 LINC01311-201ENST00000565162 1445 ntBASIC15.76■□□□□ 0.11
COL8A2P25067 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
COL8A2P25067 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL8A2P25067 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
COL8A2P25067 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.75■□□□□ 0.11
COL8A2P25067 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
COL8A2P25067 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.75■□□□□ 0.11
COL8A2P25067 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL8A2P25067 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.75■□□□□ 0.11
COL8A2P25067 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
COL8A2P25067 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL8A2P25067 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.75■□□□□ 0.11
COL8A2P25067 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL8A2P25067 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.75■□□□□ 0.11
COL8A2P25067 UPK3BP1-201ENST00000428678 509 ntBASIC15.75■□□□□ 0.11
COL8A2P25067 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.75■□□□□ 0.11
COL8A2P25067 RASA4DP-201ENST00000460726 1199 ntBASIC15.75■□□□□ 0.11
COL8A2P25067 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms