Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CCNC-219ENST00000627680 896 ntTSL 5 BASIC24.73■■□□□ 1.55
CSB-PGBD3P0DP91 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CSB-PGBD3P0DP91 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.73■■□□□ 1.55
CSB-PGBD3P0DP91 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CSB-PGBD3P0DP91 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 LSM5-204ENST00000409909 740 ntTSL 2 BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 MINOS1P3-201ENST00000457048 203 ntBASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 MOK-208ENST00000519058 917 ntTSL 2 BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CSB-PGBD3P0DP91 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 AL353692.3-201ENST00000407031 1396 ntBASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 NME4-212ENST00000621774 904 ntTSL 3 BASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 AF228730.7-201ENST00000641842 219 ntBASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.71■■□□□ 1.55
CSB-PGBD3P0DP91 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.7■■□□□ 1.55
CSB-PGBD3P0DP91 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC24.7■■□□□ 1.55
CSB-PGBD3P0DP91 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 AL157384.1-201ENST00000445995 2473 ntBASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 AC064862.7-201ENST00000604520 867 ntBASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 TP73-AS1-207ENST00000624167 988 ntBASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 CYP51A1P1-201ENST00000492267 1507 ntBASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC24.7■■□□□ 1.54
CSB-PGBD3P0DP91 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 REEP1-209ENST00000541910 969 ntTSL 2 BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 AP001005.1-201ENST00000571755 1248 ntBASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 AC011840.4-201ENST00000578471 627 ntBASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 FEM1AP3-201ENST00000403722 1741 ntBASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.69■■□□□ 1.54
CSB-PGBD3P0DP91 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms