Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FREM3P0C091 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
FREM3P0C091 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
FREM3P0C091 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.96■□□□□ 0.31
FREM3P0C091 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
FREM3P0C091 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
FREM3P0C091 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FREM3P0C091 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.96■□□□□ 0.31
FREM3P0C091 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FREM3P0C091 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.96■□□□□ 0.3
FREM3P0C091 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
FREM3P0C091 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.96■□□□□ 0.3
FREM3P0C091 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
FREM3P0C091 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FREM3P0C091 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
FREM3P0C091 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FREM3P0C091 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.95■□□□□ 0.3
FREM3P0C091 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FREM3P0C091 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
FREM3P0C091 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.95■□□□□ 0.3
FREM3P0C091 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FREM3P0C091 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
FREM3P0C091 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FREM3P0C091 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
FREM3P0C091 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FREM3P0C091 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
FREM3P0C091 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.95■□□□□ 0.3
FREM3P0C091 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.95■□□□□ 0.3
FREM3P0C091 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.95■□□□□ 0.3
FREM3P0C091 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.95■□□□□ 0.3
FREM3P0C091 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.95■□□□□ 0.3
FREM3P0C091 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.95■□□□□ 0.3
FREM3P0C091 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.95■□□□□ 0.3
FREM3P0C091 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FREM3P0C091 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.95■□□□□ 0.3
FREM3P0C091 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FREM3P0C091 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
FREM3P0C091 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FREM3P0C091 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
FREM3P0C091 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
FREM3P0C091 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.95■□□□□ 0.3
FREM3P0C091 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FREM3P0C091 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
FREM3P0C091 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FREM3P0C091 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
FREM3P0C091 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.94■□□□□ 0.3
FREM3P0C091 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
FREM3P0C091 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.94■□□□□ 0.3
FREM3P0C091 SPDYE15P-201ENST00000424157 909 ntBASIC16.94■□□□□ 0.3
FREM3P0C091 HLA-F-220ENST00000434407 884 ntBASIC16.94■□□□□ 0.3
FREM3P0C091 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.94■□□□□ 0.3
FREM3P0C091 KRT18P38-201ENST00000449496 1282 ntBASIC16.94■□□□□ 0.3
FREM3P0C091 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.94■□□□□ 0.3
FREM3P0C091 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.94■□□□□ 0.3
FREM3P0C091 HYMAI.1-201ENST00000620949 238 ntBASIC16.94■□□□□ 0.3
FREM3P0C091 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.94■□□□□ 0.3
FREM3P0C091 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.94■□□□□ 0.3
FREM3P0C091 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.94■□□□□ 0.3
FREM3P0C091 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
FREM3P0C091 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
FREM3P0C091 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
FREM3P0C091 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FREM3P0C091 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM3P0C091 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM3P0C091 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FREM3P0C091 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.94■□□□□ 0.3
FREM3P0C091 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.94■□□□□ 0.3
FREM3P0C091 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FREM3P0C091 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.94■□□□□ 0.3
FREM3P0C091 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.94■□□□□ 0.3
FREM3P0C091 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM3P0C091 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.94■□□□□ 0.3
FREM3P0C091 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.94■□□□□ 0.3
FREM3P0C091 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
FREM3P0C091 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FREM3P0C091 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.94■□□□□ 0.3
FREM3P0C091 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.94■□□□□ 0.3
FREM3P0C091 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
FREM3P0C091 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM3P0C091 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.93■□□□□ 0.3
FREM3P0C091 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
FREM3P0C091 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM3P0C091 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
FREM3P0C091 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.93■□□□□ 0.3
FREM3P0C091 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.93■□□□□ 0.3
FREM3P0C091 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FREM3P0C091 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.93■□□□□ 0.3
FREM3P0C091 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.93■□□□□ 0.3
FREM3P0C091 MIR3180-5-201ENST00000583743 153 ntBASIC16.93■□□□□ 0.3
FREM3P0C091 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.93■□□□□ 0.3
FREM3P0C091 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
FREM3P0C091 AL512353.2-201ENST00000448759 1962 ntBASIC16.93■□□□□ 0.3
FREM3P0C091 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM3P0C091 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM3P0C091 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.93■□□□□ 0.3
FREM3P0C091 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM3P0C091 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FREM3P0C091 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM3P0C091 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FREM3P0C091 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms