Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RPS8P6-201ENST00000426177 609 ntBASIC21.29■■□□□ 1
ALDH1A1P00352 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.29■■□□□ 1
ALDH1A1P00352 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A1P00352 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A1P00352 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.29■■□□□ 1
ALDH1A1P00352 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.29■■□□□ 1
ALDH1A1P00352 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A1P00352 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.29■■□□□ 1
ALDH1A1P00352 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A1P00352 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A1P00352 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.29■■□□□ 1
ALDH1A1P00352 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A1P00352 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A1P00352 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.29■■□□□ 1
ALDH1A1P00352 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A1P00352 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A1P00352 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ALDH1A1P00352 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A1P00352 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A1P00352 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A1P00352 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.28■■□□□ 1
ALDH1A1P00352 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A1P00352 YBX2P1-201ENST00000394192 760 ntBASIC21.28■■□□□ 1
ALDH1A1P00352 KRT18P3-201ENST00000451602 1288 ntBASIC21.28■■□□□ 1
ALDH1A1P00352 AC112482.1-201ENST00000492080 688 ntBASIC21.28■■□□□ 1
ALDH1A1P00352 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.28■■□□□ 1
ALDH1A1P00352 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
ALDH1A1P00352 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.28■■□□□ 1
ALDH1A1P00352 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ALDH1A1P00352 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.28■■□□□ 1
ALDH1A1P00352 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.28■■□□□ 1
ALDH1A1P00352 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.28■■□□□ 1
ALDH1A1P00352 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A1P00352 HLA-J-201ENST00000462773 1622 ntBASIC21.28■■□□□ 1
ALDH1A1P00352 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A1P00352 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.28■■□□□ 1
ALDH1A1P00352 AL162377.1-201ENST00000618844 1793 ntBASIC21.28■■□□□ 1
ALDH1A1P00352 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.28■■□□□ 1
ALDH1A1P00352 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
ALDH1A1P00352 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A1P00352 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A1P00352 KRT8P32-201ENST00000512863 1461 ntBASIC21.27■■□□□ 1
ALDH1A1P00352 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A1P00352 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A1P00352 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A1P00352 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
ALDH1A1P00352 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A1P00352 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.27■■□□□ 1
ALDH1A1P00352 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.27■■□□□ 1
ALDH1A1P00352 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.27■■□□□ 1
ALDH1A1P00352 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.27■■□□□ 1
ALDH1A1P00352 AC034105.1-201ENST00000563488 319 ntBASIC21.27■■□□□ 1
ALDH1A1P00352 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
ALDH1A1P00352 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.27■■□□□ 1
ALDH1A1P00352 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A1P00352 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ALDH1A1P00352 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
ALDH1A1P00352 AL512408.1-201ENST00000569378 2000 ntBASIC21.27■■□□□ 1
ALDH1A1P00352 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A1P00352 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A1P00352 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A1P00352 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A1P00352 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ALDH1A1P00352 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.27■□□□□ 0.99
ALDH1A1P00352 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ALDH1A1P00352 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.27■□□□□ 0.99
ALDH1A1P00352 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
ALDH1A1P00352 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
ALDH1A1P00352 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A1P00352 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A1P00352 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ALDH1A1P00352 TP73-AS1-210ENST00000637775 1455 ntBASIC21.26■□□□□ 0.99
ALDH1A1P00352 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A1P00352 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.26■□□□□ 0.99
ALDH1A1P00352 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A1P00352 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A1P00352 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A1P00352 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ALDH1A1P00352 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.26■□□□□ 0.99
ALDH1A1P00352 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A1P00352 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ALDH1A1P00352 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A1P00352 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.26■□□□□ 0.99
ALDH1A1P00352 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.26■□□□□ 0.99
ALDH1A1P00352 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.26■□□□□ 0.99
ALDH1A1P00352 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.26■□□□□ 0.99
ALDH1A1P00352 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A1P00352 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A1P00352 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ALDH1A1P00352 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ALDH1A1P00352 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.26■□□□□ 0.99
ALDH1A1P00352 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.26■□□□□ 0.99
ALDH1A1P00352 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.25■□□□□ 0.99
ALDH1A1P00352 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A1P00352 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A1P00352 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A1P00352 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A1P00352 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.25■□□□□ 0.99
ALDH1A1P00352 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A1P00352 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms