Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CBX6O95503 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX6O95503 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX6O95503 POM121L13P-201ENST00000422362 380 ntBASIC18.62■□□□□ 0.57
CBX6O95503 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.62■□□□□ 0.57
CBX6O95503 BX088651.1-201ENST00000540551 451 ntBASIC18.62■□□□□ 0.57
CBX6O95503 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.62■□□□□ 0.57
CBX6O95503 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.62■□□□□ 0.57
CBX6O95503 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX6O95503 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CBX6O95503 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CBX6O95503 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX6O95503 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 LINC00896-202ENST00000609602 2128 ntBASIC18.62■□□□□ 0.57
CBX6O95503 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CBX6O95503 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.61■□□□□ 0.57
CBX6O95503 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.61■□□□□ 0.57
CBX6O95503 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 AC126763.1-201ENST00000552015 2118 ntBASIC18.61■□□□□ 0.57
CBX6O95503 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CBX6O95503 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.61■□□□□ 0.57
CBX6O95503 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.61■□□□□ 0.57
CBX6O95503 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.61■□□□□ 0.57
CBX6O95503 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.61■□□□□ 0.57
CBX6O95503 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.61■□□□□ 0.57
CBX6O95503 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.61■□□□□ 0.57
CBX6O95503 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.61■□□□□ 0.57
CBX6O95503 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX6O95503 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.61■□□□□ 0.57
CBX6O95503 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CBX6O95503 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CBX6O95503 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CBX6O95503 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.6■□□□□ 0.57
CBX6O95503 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.6■□□□□ 0.57
CBX6O95503 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CBX6O95503 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CBX6O95503 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CBX6O95503 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CBX6O95503 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CBX6O95503 AC012618.2-201ENST00000428058 849 ntBASIC18.6■□□□□ 0.57
CBX6O95503 KRT18P21-201ENST00000515767 1272 ntBASIC18.6■□□□□ 0.57
CBX6O95503 AC233702.5-201ENST00000584107 538 ntBASIC18.6■□□□□ 0.57
CBX6O95503 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CBX6O95503 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CBX6O95503 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.6■□□□□ 0.57
CBX6O95503 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.6■□□□□ 0.57
CBX6O95503 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.6■□□□□ 0.57
CBX6O95503 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CBX6O95503 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CBX6O95503 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CBX6O95503 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CBX6O95503 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CBX6O95503 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CBX6O95503 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.6■□□□□ 0.57
CBX6O95503 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.6■□□□□ 0.57
CBX6O95503 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CBX6O95503 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CBX6O95503 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CBX6O95503 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.59■□□□□ 0.57
CBX6O95503 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CBX6O95503 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CBX6O95503 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.59■□□□□ 0.57
CBX6O95503 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CBX6O95503 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CBX6O95503 KRT17P2-201ENST00000300992 1314 ntBASIC18.59■□□□□ 0.57
CBX6O95503 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CBX6O95503 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CBX6O95503 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.59■□□□□ 0.57
CBX6O95503 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CBX6O95503 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CBX6O95503 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CBX6O95503 RPS2P55-201ENST00000397318 883 ntBASIC18.59■□□□□ 0.57
CBX6O95503 AC107956.1-201ENST00000494359 873 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms