Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.04■□□□□ 0.8
CSPG5O95196 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.04■□□□□ 0.8
CSPG5O95196 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSPG5O95196 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSPG5O95196 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.04■□□□□ 0.8
CSPG5O95196 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.04■□□□□ 0.8
CSPG5O95196 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CSPG5O95196 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSPG5O95196 AC093525.10-201ENST00000625130 1569 ntBASIC20.04■□□□□ 0.8
CSPG5O95196 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSPG5O95196 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSPG5O95196 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSPG5O95196 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.03■□□□□ 0.8
CSPG5O95196 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.03■□□□□ 0.8
CSPG5O95196 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSPG5O95196 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSPG5O95196 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSPG5O95196 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSPG5O95196 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.03■□□□□ 0.8
CSPG5O95196 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.03■□□□□ 0.8
CSPG5O95196 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.03■□□□□ 0.8
CSPG5O95196 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.03■□□□□ 0.8
CSPG5O95196 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.03■□□□□ 0.8
CSPG5O95196 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CSPG5O95196 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.03■□□□□ 0.8
CSPG5O95196 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSPG5O95196 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSPG5O95196 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSPG5O95196 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSPG5O95196 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.03■□□□□ 0.8
CSPG5O95196 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
CSPG5O95196 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.03■□□□□ 0.8
CSPG5O95196 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.03■□□□□ 0.8
CSPG5O95196 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSPG5O95196 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSPG5O95196 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.02■□□□□ 0.8
CSPG5O95196 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CSPG5O95196 Z83836.1-201ENST00000624605 1642 ntBASIC20.02■□□□□ 0.8
CSPG5O95196 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.02■□□□□ 0.8
CSPG5O95196 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.02■□□□□ 0.8
CSPG5O95196 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSPG5O95196 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CSPG5O95196 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSPG5O95196 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSPG5O95196 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSPG5O95196 NUS1P1-201ENST00000446295 882 ntBASIC20.02■□□□□ 0.8
CSPG5O95196 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSPG5O95196 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSPG5O95196 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSPG5O95196 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.02■□□□□ 0.8
CSPG5O95196 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.02■□□□□ 0.8
CSPG5O95196 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.02■□□□□ 0.8
CSPG5O95196 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CSPG5O95196 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSPG5O95196 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSPG5O95196 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSPG5O95196 AFG3L1P-217ENST00000557444 2447 ntBASIC20.02■□□□□ 0.79
CSPG5O95196 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CSPG5O95196 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSPG5O95196 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSPG5O95196 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSPG5O95196 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.01■□□□□ 0.79
CSPG5O95196 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.01■□□□□ 0.79
CSPG5O95196 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CSPG5O95196 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSPG5O95196 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSPG5O95196 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSPG5O95196 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSPG5O95196 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.01■□□□□ 0.79
CSPG5O95196 TSPY19P-201ENST00000418461 509 ntBASIC20.01■□□□□ 0.79
CSPG5O95196 TSPY18P-201ENST00000441642 509 ntBASIC20.01■□□□□ 0.79
CSPG5O95196 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.01■□□□□ 0.79
CSPG5O95196 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.01■□□□□ 0.79
CSPG5O95196 LINC01711-201ENST00000598340 967 ntBASIC20.01■□□□□ 0.79
CSPG5O95196 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
CSPG5O95196 AL121772.3-201ENST00000610840 674 ntBASIC20.01■□□□□ 0.79
CSPG5O95196 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSPG5O95196 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.01■□□□□ 0.79
CSPG5O95196 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSPG5O95196 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CSPG5O95196 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSPG5O95196 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSPG5O95196 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.01■□□□□ 0.79
CSPG5O95196 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSPG5O95196 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSPG5O95196 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.01■□□□□ 0.79
CSPG5O95196 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSPG5O95196 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CSPG5O95196 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20■□□□□ 0.79
CSPG5O95196 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20■□□□□ 0.79
CSPG5O95196 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSPG5O95196 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20■□□□□ 0.79
CSPG5O95196 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CSPG5O95196 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20■□□□□ 0.79
CSPG5O95196 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20■□□□□ 0.79
CSPG5O95196 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20■□□□□ 0.79
CSPG5O95196 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20■□□□□ 0.79
CSPG5O95196 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CSPG5O95196 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20■□□□□ 0.79
CSPG5O95196 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms