Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AL499627.1-201ENST00000569373 2188 ntBASIC16.3■□□□□ 0.2
UPK1BO75841 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK1BO75841 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.3■□□□□ 0.2
UPK1BO75841 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK1BO75841 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK1BO75841 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK1BO75841 DOC2GP-204ENST00000639052 2548 ntBASIC16.3■□□□□ 0.2
UPK1BO75841 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.3■□□□□ 0.2
UPK1BO75841 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK1BO75841 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.3■□□□□ 0.2
UPK1BO75841 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.3■□□□□ 0.2
UPK1BO75841 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.3■□□□□ 0.2
UPK1BO75841 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UPK1BO75841 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.29■□□□□ 0.2
UPK1BO75841 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.29■□□□□ 0.2
UPK1BO75841 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UPK1BO75841 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.29■□□□□ 0.2
UPK1BO75841 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UPK1BO75841 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
UPK1BO75841 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.29■□□□□ 0.2
UPK1BO75841 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UPK1BO75841 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.29■□□□□ 0.2
UPK1BO75841 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.29■□□□□ 0.2
UPK1BO75841 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.29■□□□□ 0.2
UPK1BO75841 AC079140.4-201ENST00000507448 529 ntBASIC16.29■□□□□ 0.2
UPK1BO75841 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.29■□□□□ 0.2
UPK1BO75841 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.29■□□□□ 0.2
UPK1BO75841 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.29■□□□□ 0.2
UPK1BO75841 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.29■□□□□ 0.2
UPK1BO75841 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.29■□□□□ 0.2
UPK1BO75841 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UPK1BO75841 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UPK1BO75841 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
UPK1BO75841 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK1BO75841 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
UPK1BO75841 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 FLJ38576-201ENST00000623820 2459 ntBASIC16.28■□□□□ 0.2
UPK1BO75841 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UPK1BO75841 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UPK1BO75841 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
UPK1BO75841 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 LINC01126-201ENST00000623515 1646 ntBASIC16.28■□□□□ 0.2
UPK1BO75841 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UPK1BO75841 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 KRT16P3-201ENST00000439127 1283 ntBASIC16.28■□□□□ 0.2
UPK1BO75841 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.28■□□□□ 0.2
UPK1BO75841 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.28■□□□□ 0.2
UPK1BO75841 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
UPK1BO75841 AC116351.2-201ENST00000606540 1585 ntBASIC16.28■□□□□ 0.2
UPK1BO75841 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.28■□□□□ 0.2
UPK1BO75841 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK1BO75841 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.28■□□□□ 0.2
UPK1BO75841 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms