Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
GPC4O75487 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
GPC4O75487 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
GPC4O75487 TSPY7P-201ENST00000431358 1114 ntBASIC18.74■□□□□ 0.59
GPC4O75487 AL355355.2-201ENST00000442321 338 ntBASIC18.74■□□□□ 0.59
GPC4O75487 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.74■□□□□ 0.59
GPC4O75487 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
GPC4O75487 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.74■□□□□ 0.59
GPC4O75487 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
GPC4O75487 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 AP000692.2-201ENST00000608391 879 ntBASIC18.74■□□□□ 0.59
GPC4O75487 REXO1L10P-201ENST00000615707 1290 ntBASIC18.74■□□□□ 0.59
GPC4O75487 REXO1L12P-201ENST00000622156 912 ntBASIC18.74■□□□□ 0.59
GPC4O75487 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
GPC4O75487 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
GPC4O75487 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
GPC4O75487 FEM1AP3-201ENST00000403722 1741 ntBASIC18.74■□□□□ 0.59
GPC4O75487 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.74■□□□□ 0.59
GPC4O75487 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.74■□□□□ 0.59
GPC4O75487 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
GPC4O75487 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC4O75487 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC4O75487 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GPC4O75487 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC4O75487 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
GPC4O75487 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC4O75487 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC4O75487 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC4O75487 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
GPC4O75487 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.73■□□□□ 0.59
GPC4O75487 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.73■□□□□ 0.59
GPC4O75487 SNORA78-201ENST00000459373 127 ntBASIC18.73■□□□□ 0.59
GPC4O75487 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.73■□□□□ 0.59
GPC4O75487 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.73■□□□□ 0.59
GPC4O75487 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
GPC4O75487 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
GPC4O75487 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC4O75487 AC104581.1-202ENST00000635932 2618 ntBASIC18.73■□□□□ 0.59
GPC4O75487 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
GPC4O75487 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC4O75487 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC4O75487 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
GPC4O75487 FP475955.4-201ENST00000623131 1990 ntBASIC18.73■□□□□ 0.59
GPC4O75487 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
GPC4O75487 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GPC4O75487 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
GPC4O75487 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.73■□□□□ 0.59
GPC4O75487 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC4O75487 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GPC4O75487 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC4O75487 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC4O75487 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.72■□□□□ 0.59
GPC4O75487 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
GPC4O75487 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
GPC4O75487 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC4O75487 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GPC4O75487 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC4O75487 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC4O75487 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.72■□□□□ 0.59
GPC4O75487 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC4O75487 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
GPC4O75487 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GPC4O75487 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
GPC4O75487 AC093827.2-201ENST00000512654 315 ntBASIC18.72■□□□□ 0.59
GPC4O75487 PRSS44-201ENST00000515154 1146 ntBASIC18.72■□□□□ 0.59
GPC4O75487 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GPC4O75487 AP003071.4-201ENST00000562276 1284 ntBASIC18.72■□□□□ 0.59
GPC4O75487 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.72■□□□□ 0.59
GPC4O75487 MIR4497-201ENST00000583208 89 ntBASIC18.72■□□□□ 0.59
GPC4O75487 MIR4785-201ENST00000585005 73 ntBASIC18.72■□□□□ 0.59
GPC4O75487 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.72■□□□□ 0.59
GPC4O75487 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC4O75487 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GPC4O75487 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC4O75487 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
GPC4O75487 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GPC4O75487 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.71■□□□□ 0.59
GPC4O75487 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.71■□□□□ 0.59
GPC4O75487 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GPC4O75487 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.71■□□□□ 0.59
GPC4O75487 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms