Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF253O75346 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
ZNF253O75346 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.55□□□□□ -0.08
ZNF253O75346 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF253O75346 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.55□□□□□ -0.08
ZNF253O75346 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.55□□□□□ -0.08
ZNF253O75346 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 AC083906.6-201ENST00000641366 219 ntBASIC14.55□□□□□ -0.08
ZNF253O75346 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
ZNF253O75346 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF253O75346 AC009053.2-201ENST00000563701 2365 ntBASIC14.55□□□□□ -0.08
ZNF253O75346 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
ZNF253O75346 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ZNF253O75346 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
ZNF253O75346 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF253O75346 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF253O75346 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF253O75346 AC124283.5-201ENST00000624661 1809 ntBASIC14.55□□□□□ -0.08
ZNF253O75346 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ZNF253O75346 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF253O75346 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.54□□□□□ -0.08
ZNF253O75346 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
ZNF253O75346 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
ZNF253O75346 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ZNF253O75346 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF253O75346 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF253O75346 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
ZNF253O75346 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF253O75346 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF253O75346 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF253O75346 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ZNF253O75346 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ZNF253O75346 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
ZNF253O75346 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF253O75346 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF253O75346 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ZNF253O75346 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF253O75346 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF253O75346 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZNF253O75346 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.53□□□□□ -0.08
ZNF253O75346 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
ZNF253O75346 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF253O75346 AL512353.2-201ENST00000448759 1962 ntBASIC14.53□□□□□ -0.08
ZNF253O75346 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF253O75346 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF253O75346 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 AC092368.3-202ENST00000574180 1591 ntBASIC14.53□□□□□ -0.08
ZNF253O75346 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
ZNF253O75346 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF253O75346 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZNF253O75346 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZNF253O75346 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 TSPY21P-201ENST00000433481 731 ntBASIC14.53□□□□□ -0.08
ZNF253O75346 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF253O75346 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF253O75346 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF253O75346 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF253O75346 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF253O75346 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF253O75346 MIR4758-201ENST00000577688 71 ntBASIC14.53□□□□□ -0.08
ZNF253O75346 AC060766.5-201ENST00000590539 871 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms