Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.21■□□□□ 0.51
HDAC3O15379 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.21■□□□□ 0.51
HDAC3O15379 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.21■□□□□ 0.51
HDAC3O15379 POU5F1P3-201ENST00000428824 1078 ntBASIC18.21■□□□□ 0.51
HDAC3O15379 NCF1B-203ENST00000435988 1254 ntBASIC18.21■□□□□ 0.51
HDAC3O15379 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.21■□□□□ 0.51
HDAC3O15379 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC3O15379 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
HDAC3O15379 AC004264.1-201ENST00000608354 794 ntBASIC18.21■□□□□ 0.51
HDAC3O15379 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.21■□□□□ 0.51
HDAC3O15379 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
HDAC3O15379 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC3O15379 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC3O15379 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC3O15379 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HDAC3O15379 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
HDAC3O15379 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC3O15379 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.21■□□□□ 0.51
HDAC3O15379 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC3O15379 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC3O15379 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
HDAC3O15379 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.21■□□□□ 0.5
HDAC3O15379 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 GNAS-203ENST00000306120 1878 ntBASIC18.2■□□□□ 0.5
HDAC3O15379 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.2■□□□□ 0.5
HDAC3O15379 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HDAC3O15379 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HDAC3O15379 SLC25A6P5-201ENST00000435663 894 ntBASIC18.2■□□□□ 0.5
HDAC3O15379 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
HDAC3O15379 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.2■□□□□ 0.5
HDAC3O15379 UNC93B4-201ENST00000505679 747 ntBASIC18.2■□□□□ 0.5
HDAC3O15379 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.2■□□□□ 0.5
HDAC3O15379 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.2■□□□□ 0.5
HDAC3O15379 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HDAC3O15379 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.2■□□□□ 0.5
HDAC3O15379 KRT8P45-201ENST00000414328 1447 ntBASIC18.2■□□□□ 0.5
HDAC3O15379 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.2■□□□□ 0.5
HDAC3O15379 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.2■□□□□ 0.5
HDAC3O15379 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
HDAC3O15379 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.2■□□□□ 0.5
HDAC3O15379 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.2■□□□□ 0.5
HDAC3O15379 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDAC3O15379 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HDAC3O15379 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HDAC3O15379 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 HTR7P1-202ENST00000624664 4411 ntBASIC18.19■□□□□ 0.5
HDAC3O15379 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HDAC3O15379 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
HDAC3O15379 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HDAC3O15379 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 POM121L13P-201ENST00000422362 380 ntBASIC18.19■□□□□ 0.5
HDAC3O15379 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.19■□□□□ 0.5
HDAC3O15379 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.19■□□□□ 0.5
HDAC3O15379 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.19■□□□□ 0.5
HDAC3O15379 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.19■□□□□ 0.5
HDAC3O15379 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.19■□□□□ 0.5
HDAC3O15379 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 AC134043.2-201ENST00000624206 2238 ntBASIC18.19■□□□□ 0.5
HDAC3O15379 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HDAC3O15379 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.19■□□□□ 0.5
HDAC3O15379 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC3O15379 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.18■□□□□ 0.5
HDAC3O15379 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.18■□□□□ 0.5
HDAC3O15379 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC3O15379 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC3O15379 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HDAC3O15379 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC3O15379 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
HDAC3O15379 KRT8P3-201ENST00000519669 1449 ntBASIC18.18■□□□□ 0.5
HDAC3O15379 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC3O15379 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC3O15379 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC3O15379 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms