Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.29■■□□□ 1.16
FOXN1O15353 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FOXN1O15353 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FOXN1O15353 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXN1O15353 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC22.29■■□□□ 1.16
FOXN1O15353 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
FOXN1O15353 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
FOXN1O15353 TSPY22P-201ENST00000427496 604 ntBASIC22.29■■□□□ 1.16
FOXN1O15353 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC22.29■■□□□ 1.16
FOXN1O15353 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC22.29■■□□□ 1.16
FOXN1O15353 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.29■■□□□ 1.16
FOXN1O15353 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.29■■□□□ 1.16
FOXN1O15353 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.29■■□□□ 1.16
FOXN1O15353 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXN1O15353 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
FOXN1O15353 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXN1O15353 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
FOXN1O15353 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FOXN1O15353 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FOXN1O15353 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.29■■□□□ 1.16
FOXN1O15353 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXN1O15353 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FOXN1O15353 AC009237.14-201ENST00000609975 1594 ntBASIC22.29■■□□□ 1.16
FOXN1O15353 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXN1O15353 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXN1O15353 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FOXN1O15353 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.28■■□□□ 1.16
FOXN1O15353 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
FOXN1O15353 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
FOXN1O15353 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
FOXN1O15353 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC22.28■■□□□ 1.16
FOXN1O15353 SAPCD2P3-201ENST00000455031 850 ntBASIC22.28■■□□□ 1.16
FOXN1O15353 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22.28■■□□□ 1.16
FOXN1O15353 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.28■■□□□ 1.16
FOXN1O15353 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.28■■□□□ 1.16
FOXN1O15353 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
FOXN1O15353 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
FOXN1O15353 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
FOXN1O15353 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FOXN1O15353 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FOXN1O15353 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.28■■□□□ 1.16
FOXN1O15353 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
FOXN1O15353 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FOXN1O15353 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXN1O15353 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXN1O15353 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXN1O15353 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXN1O15353 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXN1O15353 AL031284.1-201ENST00000419297 478 ntBASIC22.27■■□□□ 1.16
FOXN1O15353 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.27■■□□□ 1.16
FOXN1O15353 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
FOXN1O15353 AF238378.1-201ENST00000526806 358 ntBASIC22.27■■□□□ 1.16
FOXN1O15353 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.27■■□□□ 1.16
FOXN1O15353 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXN1O15353 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.27■■□□□ 1.16
FOXN1O15353 AC239800.4-201ENST00000603712 296 ntBASIC22.27■■□□□ 1.16
FOXN1O15353 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.27■■□□□ 1.16
FOXN1O15353 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.27■■□□□ 1.16
FOXN1O15353 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
FOXN1O15353 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXN1O15353 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXN1O15353 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FOXN1O15353 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
FOXN1O15353 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXN1O15353 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXN1O15353 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FOXN1O15353 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
FOXN1O15353 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC22.26■■□□□ 1.15
FOXN1O15353 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.26■■□□□ 1.15
FOXN1O15353 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FOXN1O15353 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXN1O15353 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXN1O15353 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXN1O15353 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
FOXN1O15353 AC005332.7-201ENST00000614046 2005 ntBASIC22.26■■□□□ 1.15
FOXN1O15353 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
FOXN1O15353 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
FOXN1O15353 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FOXN1O15353 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
FOXN1O15353 AC243591.1-201ENST00000452967 1364 ntBASIC22.25■■□□□ 1.15
FOXN1O15353 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
FOXN1O15353 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
FOXN1O15353 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXN1O15353 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXN1O15353 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.25■■□□□ 1.15
FOXN1O15353 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXN1O15353 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
FOXN1O15353 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXN1O15353 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXN1O15353 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXN1O15353 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.25■■□□□ 1.15
FOXN1O15353 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXN1O15353 RPL18-209ENST00000550645 463 ntTSL 5 BASIC22.25■■□□□ 1.15
FOXN1O15353 RPL18-214ENST00000552588 559 ntTSL 3 BASIC22.25■■□□□ 1.15
FOXN1O15353 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC22.25■■□□□ 1.15
FOXN1O15353 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXN1O15353 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC22.25■■□□□ 1.15
FOXN1O15353 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXN1O15353 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
FOXN1O15353 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms