Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBFD1O14562 AC008764.6-201ENST00000595909 2069 ntBASIC18.15■□□□□ 0.5
UBFD1O14562 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBFD1O14562 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBFD1O14562 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBFD1O14562 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
UBFD1O14562 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.15■□□□□ 0.5
UBFD1O14562 AC011506.1-201ENST00000474329 610 ntBASIC18.15■□□□□ 0.5
UBFD1O14562 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.15■□□□□ 0.5
UBFD1O14562 MIR4651-201ENST00000582622 73 ntBASIC18.15■□□□□ 0.5
UBFD1O14562 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBFD1O14562 AC011298.2-201ENST00000617989 482 ntBASIC18.15■□□□□ 0.5
UBFD1O14562 AC130371.2-201ENST00000619443 611 ntBASIC18.15■□□□□ 0.5
UBFD1O14562 CR392000.1-201ENST00000624770 1228 ntBASIC18.15■□□□□ 0.5
UBFD1O14562 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBFD1O14562 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.15■□□□□ 0.5
UBFD1O14562 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBFD1O14562 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBFD1O14562 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBFD1O14562 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.15■□□□□ 0.5
UBFD1O14562 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.15■□□□□ 0.5
UBFD1O14562 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBFD1O14562 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBFD1O14562 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UBFD1O14562 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
UBFD1O14562 AC093677.2-201ENST00000600169 1863 ntBASIC18.14■□□□□ 0.49
UBFD1O14562 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
UBFD1O14562 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
UBFD1O14562 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
UBFD1O14562 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.14■□□□□ 0.49
UBFD1O14562 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.14■□□□□ 0.49
UBFD1O14562 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
UBFD1O14562 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 C1QBPP2-201ENST00000528754 825 ntBASIC18.14■□□□□ 0.49
UBFD1O14562 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
UBFD1O14562 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.14■□□□□ 0.49
UBFD1O14562 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UBFD1O14562 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.14■□□□□ 0.49
UBFD1O14562 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBFD1O14562 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
UBFD1O14562 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBFD1O14562 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBFD1O14562 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBFD1O14562 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBFD1O14562 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
UBFD1O14562 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.13■□□□□ 0.49
UBFD1O14562 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBFD1O14562 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBFD1O14562 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
UBFD1O14562 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBFD1O14562 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
UBFD1O14562 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.13■□□□□ 0.49
UBFD1O14562 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.13■□□□□ 0.49
UBFD1O14562 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
UBFD1O14562 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.13■□□□□ 0.49
UBFD1O14562 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
UBFD1O14562 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.13■□□□□ 0.49
UBFD1O14562 AC026271.3-201ENST00000571884 352 ntBASIC18.13■□□□□ 0.49
UBFD1O14562 AF186192.3-201ENST00000583427 947 ntBASIC18.13■□□□□ 0.49
UBFD1O14562 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
UBFD1O14562 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.13■□□□□ 0.49
UBFD1O14562 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.13■□□□□ 0.49
UBFD1O14562 ESPNP-201ENST00000270691 2015 ntBASIC18.13■□□□□ 0.49
UBFD1O14562 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBFD1O14562 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.13■□□□□ 0.49
UBFD1O14562 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBFD1O14562 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBFD1O14562 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.13■□□□□ 0.49
UBFD1O14562 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBFD1O14562 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBFD1O14562 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBFD1O14562 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.12■□□□□ 0.49
UBFD1O14562 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.12■□□□□ 0.49
UBFD1O14562 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
UBFD1O14562 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBFD1O14562 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.12■□□□□ 0.49
UBFD1O14562 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
UBFD1O14562 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
UBFD1O14562 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.12■□□□□ 0.49
UBFD1O14562 AC008556.1-201ENST00000610908 2040 ntBASIC18.12■□□□□ 0.49
UBFD1O14562 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBFD1O14562 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.12■□□□□ 0.49
UBFD1O14562 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBFD1O14562 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.12■□□□□ 0.49
UBFD1O14562 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.12■□□□□ 0.49
UBFD1O14562 MYC-208ENST00000641036 567 ntBASIC18.12■□□□□ 0.49
UBFD1O14562 AL031985.4-201ENST00000642138 673 ntBASIC18.12■□□□□ 0.49
UBFD1O14562 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms