Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EIF3FO00303 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EIF3FO00303 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.28■□□□□ 0.52
EIF3FO00303 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
EIF3FO00303 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EIF3FO00303 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.28■□□□□ 0.52
EIF3FO00303 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
EIF3FO00303 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EIF3FO00303 AL390955.1-201ENST00000428694 934 ntBASIC18.28■□□□□ 0.52
EIF3FO00303 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.28■□□□□ 0.52
EIF3FO00303 AC093827.2-201ENST00000512654 315 ntBASIC18.28■□□□□ 0.52
EIF3FO00303 MIR4674-201ENST00000582457 87 ntBASIC18.28■□□□□ 0.52
EIF3FO00303 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EIF3FO00303 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
EIF3FO00303 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EIF3FO00303 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
EIF3FO00303 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EIF3FO00303 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EIF3FO00303 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EIF3FO00303 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.28■□□□□ 0.52
EIF3FO00303 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
EIF3FO00303 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.28■□□□□ 0.52
EIF3FO00303 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
EIF3FO00303 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
EIF3FO00303 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.28■□□□□ 0.52
EIF3FO00303 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.28■□□□□ 0.52
EIF3FO00303 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
EIF3FO00303 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.28■□□□□ 0.52
EIF3FO00303 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EIF3FO00303 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
EIF3FO00303 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
EIF3FO00303 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EIF3FO00303 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.27■□□□□ 0.52
EIF3FO00303 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.27■□□□□ 0.52
EIF3FO00303 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EIF3FO00303 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
EIF3FO00303 AC007663.1-201ENST00000438948 1240 ntBASIC18.27■□□□□ 0.52
EIF3FO00303 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EIF3FO00303 AC128688.1-201ENST00000487626 519 ntBASIC18.27■□□□□ 0.52
EIF3FO00303 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EIF3FO00303 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.27■□□□□ 0.52
EIF3FO00303 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.27■□□□□ 0.52
EIF3FO00303 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
EIF3FO00303 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
EIF3FO00303 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.51
EIF3FO00303 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EIF3FO00303 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EIF3FO00303 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EIF3FO00303 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
EIF3FO00303 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.26■□□□□ 0.51
EIF3FO00303 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.26■□□□□ 0.51
EIF3FO00303 HOXB1-202ENST00000577092 1414 ntBASIC18.26■□□□□ 0.51
EIF3FO00303 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
EIF3FO00303 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.26■□□□□ 0.51
EIF3FO00303 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 MMP23A-201ENST00000234610 1017 ntBASIC18.26■□□□□ 0.51
EIF3FO00303 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
EIF3FO00303 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.26■□□□□ 0.51
EIF3FO00303 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.26■□□□□ 0.51
EIF3FO00303 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
EIF3FO00303 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.26■□□□□ 0.51
EIF3FO00303 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.26■□□□□ 0.51
EIF3FO00303 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.26■□□□□ 0.51
EIF3FO00303 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
EIF3FO00303 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
EIF3FO00303 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
EIF3FO00303 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.26■□□□□ 0.51
EIF3FO00303 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
EIF3FO00303 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EIF3FO00303 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EIF3FO00303 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EIF3FO00303 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EIF3FO00303 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
EIF3FO00303 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EIF3FO00303 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EIF3FO00303 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EIF3FO00303 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EIF3FO00303 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.25■□□□□ 0.51
EIF3FO00303 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EIF3FO00303 NAPSB-206ENST00000562112 1266 ntBASIC18.25■□□□□ 0.51
EIF3FO00303 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EIF3FO00303 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.25■□□□□ 0.51
EIF3FO00303 AC066615.1-201ENST00000640911 628 ntBASIC18.25■□□□□ 0.51
EIF3FO00303 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EIF3FO00303 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
EIF3FO00303 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms