Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 AL357033.4-201ENST00000617703 1807 ntBASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 AIRN-201ENST00000601203 4374 ntBASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 ZNRF2P3-201ENST00000424200 374 ntBASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.5■□□□□ 0.39
TCRBV3S1A0A5B6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 AC133552.2-202ENST00000575694 574 ntBASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 AC106820.2-201ENST00000563775 3264 ntBASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.49■□□□□ 0.39
TCRBV3S1A0A5B6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV3S1A0A5B6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV3S1A0A5B6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms