Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AL109659.2-201ENST00000606809 1674 ntBASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 RPSAP43-201ENST00000402237 625 ntBASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 SCARNA2-201ENST00000458748 420 ntBASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 AC096582.2-201ENST00000510860 516 ntBASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 AL356488.2-201ENST00000602755 427 ntBASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCH2Q9Y6C5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 TREX1-205ENST00000625293 1783 ntBASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 AC104109.2-201ENST00000602919 1418 ntBASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 AC027601.4-201ENST00000611259 610 ntBASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.08■□□□□ 0.97
PTCH2Q9Y6C5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.08■□□□□ 0.96
PTCH2Q9Y6C5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PTCH2Q9Y6C5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 GPX1P2-201ENST00000429271 606 ntBASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 AC114341.1-201ENST00000618070 349 ntBASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 RCC2P3-201ENST00000418112 1537 ntBASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCH2Q9Y6C5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 MED15P5-201ENST00000423150 992 ntBASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 AC145285.3-201ENST00000564603 959 ntBASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 AL355877.3-201ENST00000622820 899 ntBASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.06■□□□□ 0.96
PTCH2Q9Y6C5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 AL162377.1-201ENST00000618844 1793 ntBASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCH2Q9Y6C5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms