Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN10AQ9Y5Y9 AL353692.3-201ENST00000407031 1396 ntBASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 GUSBP12-201ENST00000513727 720 ntBASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 AL357033.4-201ENST00000617703 1807 ntBASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 BNIP3P18-201ENST00000593976 575 ntBASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCN10AQ9Y5Y9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.47■□□□□ 0.87
SCN10AQ9Y5Y9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 AL158211.5-201ENST00000623583 2518 ntBASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 AF238378.1-201ENST00000526806 358 ntBASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.46■□□□□ 0.87
SCN10AQ9Y5Y9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
SCN10AQ9Y5Y9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 AC005336.2-201ENST00000593183 939 ntBASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 CLDN5-201ENST00000403084 2357 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms