Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 AL031598.1-201ENST00000561511 1773 ntBASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB16Q9NRJ7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB16Q9NRJ7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB16Q9NRJ7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHB16Q9NRJ7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB16Q9NRJ7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB16Q9NRJ7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB16Q9NRJ7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB16Q9NRJ7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB16Q9NRJ7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB16Q9NRJ7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB16Q9NRJ7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB16Q9NRJ7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB16Q9NRJ7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 AC141586.5-201ENST00000624546 2050 ntBASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB16Q9NRJ7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 UNC93B4-201ENST00000505679 747 ntBASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB16Q9NRJ7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms