Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 KRT18P16-201ENST00000510337 1294 ntBASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 C1QL1P1-201ENST00000568105 661 ntBASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.99■□□□□ 0.47
TIMMDC1Q9NPL8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 AP003071.4-201ENST00000562276 1284 ntBASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 AP001271.2-201ENST00000624018 1556 ntBASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMMDC1Q9NPL8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 BX088651.1-201ENST00000540551 451 ntBASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 REXO1L12P-201ENST00000622156 912 ntBASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 CR392000.1-201ENST00000624770 1228 ntBASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 BCL2-203ENST00000589955 5011 ntBASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 KRT16P1-201ENST00000399124 1418 ntBASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TIMMDC1Q9NPL8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 AL691432.2-201ENST00000607222 2038 ntBASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TIMMDC1Q9NPL8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms