Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 HCG11-201ENST00000411553 5696 ntBASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 AL353719.1-201ENST00000566847 864 ntBASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 AC140113.3-201ENST00000605663 199 ntBASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
POLR1BQ9H9Y6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 Z82202.1-201ENST00000623446 1880 ntBASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 LTB4R2-202ENST00000528054 3092 ntBASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR1BQ9H9Y6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 AL671277.2-201ENST00000458060 996 ntBASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 Z85996.1-201ENST00000494644 937 ntBASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 AC093458.2-201ENST00000623150 629 ntBASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR1BQ9H9Y6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
POLR1BQ9H9Y6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms