Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNF1Q9H3M0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNF1Q9H3M0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNF1Q9H3M0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNF1Q9H3M0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 KRT18P11-201ENST00000435214 1283 ntBASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 AC018695.7-201ENST00000624587 2492 ntBASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNF1Q9H3M0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
KCNF1Q9H3M0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KCNF1Q9H3M0 AP001094.4-201ENST00000579008 2176 ntBASIC20.39■□□□□ 0.86
KCNF1Q9H3M0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
KCNF1Q9H3M0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KCNF1Q9H3M0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KCNF1Q9H3M0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.39■□□□□ 0.86
KCNF1Q9H3M0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 AC008694.1-202ENST00000636953 945 ntBASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNF1Q9H3M0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 NTF6G-201ENST00000591094 616 ntBASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 AC006116.8-202ENST00000587620 1550 ntBASIC20.38■□□□□ 0.85
KCNF1Q9H3M0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNF1Q9H3M0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNF1Q9H3M0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNF1Q9H3M0 KRT8P45-201ENST00000414328 1447 ntBASIC20.37■□□□□ 0.85
KCNF1Q9H3M0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.37■□□□□ 0.85
KCNF1Q9H3M0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNF1Q9H3M0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNF1Q9H3M0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNF1Q9H3M0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.37■□□□□ 0.85
KCNF1Q9H3M0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms