Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 MIR6084-201ENST00000622012 110 ntBASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 MTMR9LP-203ENST00000426597 1545 ntBASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 RASA4CP-201ENST00000424092 1398 ntBASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.48■□□□□ 0.23
SLIRPQ9GZT3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 AC006116.8-202ENST00000587620 1550 ntBASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 AIRN-201ENST00000601203 4374 ntBASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.47■□□□□ 0.23
SLIRPQ9GZT3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 PCDHB19P-201ENST00000570871 2371 ntBASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.46■□□□□ 0.23
SLIRPQ9GZT3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SLIRPQ9GZT3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SLIRPQ9GZT3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SLIRPQ9GZT3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 KRT8P8-201ENST00000434750 1448 ntBASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 KRT18P68-201ENST00000392293 1000 ntBASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLIRPQ9GZT3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms