Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NDUFAF3Q9BU61 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NDUFAF3Q9BU61 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NDUFAF3Q9BU61 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NDUFAF3Q9BU61 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 CYP2T3P-201ENST00000601990 817 ntBASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 AC083880.1-201ENST00000608266 535 ntBASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 MYC-209ENST00000641252 345 ntBASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFAF3Q9BU61 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFAF3Q9BU61 ESPNP-201ENST00000270691 2015 ntBASIC14.42□□□□□ -0.1
NDUFAF3Q9BU61 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.42□□□□□ -0.1
NDUFAF3Q9BU61 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.42□□□□□ -0.1
NDUFAF3Q9BU61 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFAF3Q9BU61 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.42□□□□□ -0.1
NDUFAF3Q9BU61 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms