Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.52■□□□□ 0.24
VRK1Q99986 C2orf69P3-201ENST00000565542 1120 ntBASIC16.52■□□□□ 0.24
VRK1Q99986 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.52■□□□□ 0.24
VRK1Q99986 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.52■□□□□ 0.24
VRK1Q99986 AC011298.2-201ENST00000617989 482 ntBASIC16.52■□□□□ 0.24
VRK1Q99986 AC005363.2-201ENST00000618631 242 ntBASIC16.52■□□□□ 0.24
VRK1Q99986 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
VRK1Q99986 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.52■□□□□ 0.24
VRK1Q99986 CYP2D8P-201ENST00000433633 1490 ntBASIC16.52■□□□□ 0.23
VRK1Q99986 LINC01465-201ENST00000408887 1940 ntBASIC16.52■□□□□ 0.23
VRK1Q99986 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VRK1Q99986 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
VRK1Q99986 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
VRK1Q99986 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
VRK1Q99986 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VRK1Q99986 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
VRK1Q99986 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.52■□□□□ 0.23
VRK1Q99986 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VRK1Q99986 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
VRK1Q99986 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.52■□□□□ 0.23
VRK1Q99986 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.52■□□□□ 0.23
VRK1Q99986 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.51■□□□□ 0.23
VRK1Q99986 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK1Q99986 PCDHB18P-201ENST00000524813 2368 ntBASIC16.51■□□□□ 0.23
VRK1Q99986 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK1Q99986 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK1Q99986 KRT18P22-201ENST00000402024 1347 ntBASIC16.51■□□□□ 0.23
VRK1Q99986 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
VRK1Q99986 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK1Q99986 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
VRK1Q99986 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VRK1Q99986 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK1Q99986 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.51■□□□□ 0.23
VRK1Q99986 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
VRK1Q99986 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
VRK1Q99986 AC004951.3-201ENST00000418645 1148 ntBASIC16.51■□□□□ 0.23
VRK1Q99986 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.51■□□□□ 0.23
VRK1Q99986 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.51■□□□□ 0.23
VRK1Q99986 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
VRK1Q99986 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
VRK1Q99986 AC145285.6-201ENST00000604632 637 ntBASIC16.51■□□□□ 0.23
VRK1Q99986 DGCR10-201ENST00000609839 495 ntBASIC16.51■□□□□ 0.23
VRK1Q99986 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.51■□□□□ 0.23
VRK1Q99986 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK1Q99986 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VRK1Q99986 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
VRK1Q99986 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VRK1Q99986 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.51■□□□□ 0.23
VRK1Q99986 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK1Q99986 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
VRK1Q99986 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK1Q99986 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK1Q99986 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.5■□□□□ 0.23
VRK1Q99986 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
VRK1Q99986 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.5■□□□□ 0.23
VRK1Q99986 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VRK1Q99986 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VRK1Q99986 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VRK1Q99986 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VRK1Q99986 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VRK1Q99986 MESTP1-201ENST00000404287 994 ntBASIC16.5■□□□□ 0.23
VRK1Q99986 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.5■□□□□ 0.23
VRK1Q99986 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.5■□□□□ 0.23
VRK1Q99986 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.5■□□□□ 0.23
VRK1Q99986 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.5■□□□□ 0.23
VRK1Q99986 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.5■□□□□ 0.23
VRK1Q99986 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 RCC2P6-201ENST00000526625 1557 ntBASIC16.5■□□□□ 0.23
VRK1Q99986 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
VRK1Q99986 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.5■□□□□ 0.23
VRK1Q99986 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VRK1Q99986 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VRK1Q99986 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK1Q99986 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK1Q99986 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
VRK1Q99986 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK1Q99986 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.49■□□□□ 0.23
VRK1Q99986 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
VRK1Q99986 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK1Q99986 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VRK1Q99986 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.49■□□□□ 0.23
VRK1Q99986 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK1Q99986 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.49■□□□□ 0.23
VRK1Q99986 RCN1P1-201ENST00000400413 996 ntBASIC16.49■□□□□ 0.23
VRK1Q99986 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.49■□□□□ 0.23
VRK1Q99986 TMPOP1-202ENST00000424642 1267 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms