Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 DGCR10-201ENST00000609839 495 ntBASIC17.36■□□□□ 0.37
TM9SF2Q99805 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 AC079598.2-202ENST00000546624 1451 ntBASIC17.36■□□□□ 0.37
TM9SF2Q99805 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF2Q99805 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF2Q99805 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TM9SF2Q99805 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 AC004980.1-204ENST00000429707 299 ntBASIC17.35■□□□□ 0.37
TM9SF2Q99805 FAM210CP-201ENST00000445714 574 ntBASIC17.35■□□□□ 0.37
TM9SF2Q99805 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF2Q99805 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TM9SF2Q99805 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF2Q99805 FITM1-202ENST00000559294 800 ntBASIC17.35■□□□□ 0.37
TM9SF2Q99805 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.35■□□□□ 0.37
TM9SF2Q99805 AC012306.2-201ENST00000609350 630 ntBASIC17.35■□□□□ 0.37
TM9SF2Q99805 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.35■□□□□ 0.37
TM9SF2Q99805 AL133373.2-201ENST00000623187 2828 ntBASIC17.35■□□□□ 0.37
TM9SF2Q99805 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF2Q99805 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TM9SF2Q99805 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TM9SF2Q99805 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF2Q99805 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TM9SF2Q99805 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TM9SF2Q99805 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TM9SF2Q99805 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TM9SF2Q99805 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.34■□□□□ 0.37
TM9SF2Q99805 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.34■□□□□ 0.37
TM9SF2Q99805 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.34■□□□□ 0.37
TM9SF2Q99805 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TM9SF2Q99805 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TM9SF2Q99805 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TM9SF2Q99805 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 AC135050.7-201ENST00000624508 2218 ntBASIC17.34■□□□□ 0.37
TM9SF2Q99805 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.34■□□□□ 0.37
TM9SF2Q99805 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.34■□□□□ 0.37
TM9SF2Q99805 BCL2-203ENST00000589955 5011 ntBASIC17.34■□□□□ 0.37
TM9SF2Q99805 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TM9SF2Q99805 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF2Q99805 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.33■□□□□ 0.37
TM9SF2Q99805 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF2Q99805 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TM9SF2Q99805 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.33■□□□□ 0.37
TM9SF2Q99805 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF2Q99805 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TM9SF2Q99805 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF2Q99805 FZD10-202ENST00000539839 3282 ntBASIC17.33■□□□□ 0.37
TM9SF2Q99805 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF2Q99805 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF2Q99805 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF2Q99805 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF2Q99805 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms