Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPENQ96T58 NSUN5P1-202ENST00000421140 1535 ntBASIC16.87■□□□□ 0.29
SPENQ96T58 NSUN5P2-203ENST00000457352 1529 ntBASIC16.87■□□□□ 0.29
SPENQ96T58 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.87■□□□□ 0.29
SPENQ96T58 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SPENQ96T58 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SPENQ96T58 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.87■□□□□ 0.29
SPENQ96T58 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.86■□□□□ 0.29
SPENQ96T58 BX842568.4-201ENST00000421222 227 ntBASIC16.86■□□□□ 0.29
SPENQ96T58 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SPENQ96T58 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.86■□□□□ 0.29
SPENQ96T58 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.86■□□□□ 0.29
SPENQ96T58 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.86■□□□□ 0.29
SPENQ96T58 MIR3180-5-201ENST00000583743 153 ntBASIC16.86■□□□□ 0.29
SPENQ96T58 AC055717.3-201ENST00000622967 595 ntBASIC16.86■□□□□ 0.29
SPENQ96T58 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
SPENQ96T58 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SPENQ96T58 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SPENQ96T58 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPENQ96T58 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SPENQ96T58 AC074051.2-201ENST00000565115 352 ntBASIC16.86■□□□□ 0.29
SPENQ96T58 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.86■□□□□ 0.29
SPENQ96T58 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPENQ96T58 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.86■□□□□ 0.29
SPENQ96T58 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPENQ96T58 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPENQ96T58 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SPENQ96T58 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPENQ96T58 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SPENQ96T58 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SPENQ96T58 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SPENQ96T58 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SPENQ96T58 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.86■□□□□ 0.29
SPENQ96T58 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.86■□□□□ 0.29
SPENQ96T58 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.86■□□□□ 0.29
SPENQ96T58 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPENQ96T58 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPENQ96T58 Z82202.1-201ENST00000623446 1880 ntBASIC16.86■□□□□ 0.29
SPENQ96T58 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.86■□□□□ 0.29
SPENQ96T58 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SPENQ96T58 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 BNIP3P18-201ENST00000593976 575 ntBASIC16.85■□□□□ 0.29
SPENQ96T58 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.85■□□□□ 0.29
SPENQ96T58 TP73-AS1-207ENST00000624167 988 ntBASIC16.85■□□□□ 0.29
SPENQ96T58 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SPENQ96T58 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.85■□□□□ 0.29
SPENQ96T58 GABARAPL3-202ENST00000624044 1851 ntBASIC16.85■□□□□ 0.29
SPENQ96T58 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
SPENQ96T58 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SPENQ96T58 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.85■□□□□ 0.29
SPENQ96T58 AC117500.6-201ENST00000624871 588 ntBASIC16.85■□□□□ 0.29
SPENQ96T58 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.85■□□□□ 0.29
SPENQ96T58 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SPENQ96T58 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SPENQ96T58 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.85■□□□□ 0.29
SPENQ96T58 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.85■□□□□ 0.29
SPENQ96T58 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.85■□□□□ 0.29
SPENQ96T58 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SPENQ96T58 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPENQ96T58 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPENQ96T58 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.84■□□□□ 0.29
SPENQ96T58 AL109659.2-201ENST00000606809 1674 ntBASIC16.84■□□□□ 0.29
SPENQ96T58 CLDN5-201ENST00000403084 2357 ntBASIC16.84■□□□□ 0.29
SPENQ96T58 AC233702.3-201ENST00000578656 1387 ntBASIC16.84■□□□□ 0.29
SPENQ96T58 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.84■□□□□ 0.29
SPENQ96T58 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.84■□□□□ 0.29
SPENQ96T58 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPENQ96T58 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPENQ96T58 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPENQ96T58 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPENQ96T58 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPENQ96T58 FP475955.4-201ENST00000623131 1990 ntBASIC16.84■□□□□ 0.29
SPENQ96T58 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPENQ96T58 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SPENQ96T58 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.84■□□□□ 0.29
SPENQ96T58 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.84■□□□□ 0.29
SPENQ96T58 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.84■□□□□ 0.29
SPENQ96T58 Z69720.1-201ENST00000601483 472 ntBASIC16.84■□□□□ 0.29
SPENQ96T58 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPENQ96T58 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.84■□□□□ 0.29
SPENQ96T58 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPENQ96T58 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPENQ96T58 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.83■□□□□ 0.29
SPENQ96T58 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
SPENQ96T58 AL049812.1-201ENST00000432563 2267 ntBASIC16.83■□□□□ 0.29
SPENQ96T58 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.83■□□□□ 0.29
SPENQ96T58 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SPENQ96T58 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms