Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB40CQ96S21 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB40CQ96S21 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RAB40CQ96S21 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
RAB40CQ96S21 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40CQ96S21 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40CQ96S21 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAB40CQ96S21 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RAB40CQ96S21 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB40CQ96S21 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 AC026185.1-201ENST00000445748 174 ntBASIC15.18■□□□□ 0.02
RAB40CQ96S21 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB40CQ96S21 LINC00896-202ENST00000609602 2128 ntBASIC15.18■□□□□ 0.02
RAB40CQ96S21 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40CQ96S21 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB40CQ96S21 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40CQ96S21 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
RAB40CQ96S21 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAB40CQ96S21 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40CQ96S21 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40CQ96S21 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
RAB40CQ96S21 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.17■□□□□ 0.02
RAB40CQ96S21 AC124283.5-201ENST00000624661 1809 ntBASIC15.17■□□□□ 0.02
RAB40CQ96S21 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 AC134043.2-201ENST00000624206 2238 ntBASIC15.17■□□□□ 0.02
RAB40CQ96S21 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 SIRPAP1-201ENST00000448467 1770 ntBASIC15.17■□□□□ 0.02
RAB40CQ96S21 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB40CQ96S21 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40CQ96S21 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms