Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
ODF3Q96PU9 AL390961.4-201ENST00000623958 2535 ntBASIC13.84□□□□□ -0.19
ODF3Q96PU9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.84□□□□□ -0.19
ODF3Q96PU9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ODF3Q96PU9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.83□□□□□ -0.19
ODF3Q96PU9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
ODF3Q96PU9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
ODF3Q96PU9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ODF3Q96PU9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ODF3Q96PU9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.83□□□□□ -0.2
ODF3Q96PU9 AL357033.4-201ENST00000617703 1807 ntBASIC13.83□□□□□ -0.2
ODF3Q96PU9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ODF3Q96PU9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ODF3Q96PU9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.83□□□□□ -0.2
ODF3Q96PU9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ODF3Q96PU9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ODF3Q96PU9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ODF3Q96PU9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.83□□□□□ -0.2
ODF3Q96PU9 AC008040.2-201ENST00000461049 708 ntBASIC13.83□□□□□ -0.2
ODF3Q96PU9 CA15P1-201ENST00000481698 905 ntBASIC13.83□□□□□ -0.2
ODF3Q96PU9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
ODF3Q96PU9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.83□□□□□ -0.2
ODF3Q96PU9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.83□□□□□ -0.2
ODF3Q96PU9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
ODF3Q96PU9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ODF3Q96PU9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ODF3Q96PU9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ODF3Q96PU9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ODF3Q96PU9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ODF3Q96PU9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.83□□□□□ -0.2
ODF3Q96PU9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ODF3Q96PU9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
ODF3Q96PU9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ODF3Q96PU9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.82□□□□□ -0.2
ODF3Q96PU9 LTB4R2-202ENST00000528054 3092 ntBASIC13.82□□□□□ -0.2
ODF3Q96PU9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.82□□□□□ -0.2
ODF3Q96PU9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.82□□□□□ -0.2
ODF3Q96PU9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.82□□□□□ -0.2
ODF3Q96PU9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ODF3Q96PU9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 KRT18P29-201ENST00000397031 1267 ntBASIC13.82□□□□□ -0.2
ODF3Q96PU9 MESTP1-201ENST00000404287 994 ntBASIC13.82□□□□□ -0.2
ODF3Q96PU9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.82□□□□□ -0.2
ODF3Q96PU9 AC116562.2-201ENST00000507042 360 ntBASIC13.82□□□□□ -0.2
ODF3Q96PU9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.82□□□□□ -0.2
ODF3Q96PU9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
ODF3Q96PU9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ODF3Q96PU9 NEFHP1-201ENST00000412845 2629 ntBASIC13.82□□□□□ -0.2
ODF3Q96PU9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ODF3Q96PU9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ODF3Q96PU9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
ODF3Q96PU9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ODF3Q96PU9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.81□□□□□ -0.2
ODF3Q96PU9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF3Q96PU9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF3Q96PU9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF3Q96PU9 AC126763.1-201ENST00000552015 2118 ntBASIC13.81□□□□□ -0.2
ODF3Q96PU9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF3Q96PU9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF3Q96PU9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF3Q96PU9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF3Q96PU9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF3Q96PU9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ODF3Q96PU9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ODF3Q96PU9 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.81□□□□□ -0.2
ODF3Q96PU9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.81□□□□□ -0.2
ODF3Q96PU9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ODF3Q96PU9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.81□□□□□ -0.2
ODF3Q96PU9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ODF3Q96PU9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.81□□□□□ -0.2
ODF3Q96PU9 NUDT16P1-203ENST00000513809 620 ntBASIC13.81□□□□□ -0.2
ODF3Q96PU9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.81□□□□□ -0.2
ODF3Q96PU9 CD177P1-201ENST00000606252 935 ntBASIC13.81□□□□□ -0.2
ODF3Q96PU9 ABALON-201ENST00000629058 1903 ntBASIC13.81□□□□□ -0.2
ODF3Q96PU9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ODF3Q96PU9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ODF3Q96PU9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ODF3Q96PU9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF3Q96PU9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ODF3Q96PU9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF3Q96PU9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms