Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 MINOS1P3-201ENST00000457048 203 ntBASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 KRT18P58-201ENST00000527480 1120 ntBASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 AC009065.1-201ENST00000564055 1225 ntBASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 AC034236.2-201ENST00000606662 1610 ntBASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.36■□□□□ 0.69
NECTIN4Q96NY8 KRT89P-201ENST00000620027 1478 ntBASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 AC093909.1-201ENST00000504731 1122 ntBASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 RNA5SP419-201ENST00000515908 135 ntBASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 AC011840.4-201ENST00000578471 627 ntBASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NECTIN4Q96NY8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 KRT18P67-201ENST00000432816 1264 ntBASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 FAM197Y8-203ENST00000450145 560 ntBASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 AF186996.4-201ENST00000467186 377 ntBASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 TP73-AS1-207ENST00000624167 988 ntBASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 AIRN-201ENST00000601203 4374 ntBASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NECTIN4Q96NY8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
NECTIN4Q96NY8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NECTIN4Q96NY8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
NECTIN4Q96NY8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NECTIN4Q96NY8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
NECTIN4Q96NY8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 AL031284.1-201ENST00000419297 478 ntBASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN4Q96NY8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 AL353692.3-201ENST00000407031 1396 ntBASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms