Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF48Q96MX3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 AC036111.1-201ENST00000533973 1582 ntBASIC15.21■□□□□ 0.03
ZNF48Q96MX3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 AL023284.2-201ENST00000405850 579 ntBASIC15.21■□□□□ 0.03
ZNF48Q96MX3 AC092597.1-201ENST00000487352 616 ntBASIC15.21■□□□□ 0.03
ZNF48Q96MX3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF48Q96MX3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.21■□□□□ 0.02
ZNF48Q96MX3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
ZNF48Q96MX3 AL032819.2-201ENST00000624543 2162 ntBASIC15.21■□□□□ 0.02
ZNF48Q96MX3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF48Q96MX3 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.2■□□□□ 0.02
ZNF48Q96MX3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 HBZP1-201ENST00000354915 429 ntBASIC15.2■□□□□ 0.02
ZNF48Q96MX3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 CLEC4GP1-201ENST00000596555 870 ntBASIC15.2■□□□□ 0.02
ZNF48Q96MX3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.2■□□□□ 0.02
ZNF48Q96MX3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF48Q96MX3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF48Q96MX3 AC026471.1-201ENST00000564629 3026 ntBASIC15.19■□□□□ 0.02
ZNF48Q96MX3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF48Q96MX3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ZNF48Q96MX3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ZNF48Q96MX3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF48Q96MX3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF48Q96MX3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
ZNF48Q96MX3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms