Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00479Q96M42 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
LINC00479Q96M42 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 AC006015.1-201ENST00000429970 570 ntBASIC14.29□□□□□ -0.12
LINC00479Q96M42 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 MIR6821-201ENST00000617625 74 ntBASIC14.29□□□□□ -0.12
LINC00479Q96M42 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.29□□□□□ -0.12
LINC00479Q96M42 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 PRORSD1P-202ENST00000563365 2154 ntBASIC14.29□□□□□ -0.12
LINC00479Q96M42 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00479Q96M42 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00479Q96M42 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 KRT18P5-201ENST00000436075 1291 ntBASIC14.28□□□□□ -0.12
LINC00479Q96M42 TUBB8P6-201ENST00000436895 1288 ntBASIC14.28□□□□□ -0.12
LINC00479Q96M42 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 KRT18P16-201ENST00000510337 1294 ntBASIC14.28□□□□□ -0.12
LINC00479Q96M42 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00479Q96M42 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00479Q96M42 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00479Q96M42 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00479Q96M42 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00479Q96M42 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC00479Q96M42 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
LINC00479Q96M42 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00479Q96M42 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
LINC00479Q96M42 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00479Q96M42 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00479Q96M42 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms