Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 FZD10-202ENST00000539839 3282 ntBASIC19.28■□□□□ 0.68
C9orf72Q96LT7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.28■□□□□ 0.68
C9orf72Q96LT7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 ABALON-201ENST00000629058 1903 ntBASIC19.28■□□□□ 0.68
C9orf72Q96LT7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.28■□□□□ 0.68
C9orf72Q96LT7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
C9orf72Q96LT7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C9orf72Q96LT7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.27■□□□□ 0.68
C9orf72Q96LT7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
C9orf72Q96LT7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
C9orf72Q96LT7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C9orf72Q96LT7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C9orf72Q96LT7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C9orf72Q96LT7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C9orf72Q96LT7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C9orf72Q96LT7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.27■□□□□ 0.68
C9orf72Q96LT7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.27■□□□□ 0.68
C9orf72Q96LT7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.27■□□□□ 0.68
C9orf72Q96LT7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
C9orf72Q96LT7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C9orf72Q96LT7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C9orf72Q96LT7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C9orf72Q96LT7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C9orf72Q96LT7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C9orf72Q96LT7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C9orf72Q96LT7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
C9orf72Q96LT7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
C9orf72Q96LT7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.67
C9orf72Q96LT7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
C9orf72Q96LT7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C9orf72Q96LT7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C9orf72Q96LT7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 AC067852.2-201ENST00000590513 2313 ntBASIC19.26■□□□□ 0.67
C9orf72Q96LT7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 TSPY21P-201ENST00000433481 731 ntBASIC19.26■□□□□ 0.67
C9orf72Q96LT7 TSPY23P-201ENST00000440136 739 ntBASIC19.26■□□□□ 0.67
C9orf72Q96LT7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 MIR4497-201ENST00000583208 89 ntBASIC19.26■□□□□ 0.67
C9orf72Q96LT7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
C9orf72Q96LT7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 AC073592.3-201ENST00000625118 1834 ntBASIC19.25■□□□□ 0.67
C9orf72Q96LT7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 AC090340.1-201ENST00000620778 4980 ntBASIC19.25■□□□□ 0.67
C9orf72Q96LT7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms