Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.74■□□□□ 0.11
TIMD4Q96H15 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMD4Q96H15 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMD4Q96H15 RCC2P3-201ENST00000418112 1537 ntBASIC15.73■□□□□ 0.11
TIMD4Q96H15 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMD4Q96H15 AL109659.2-201ENST00000606809 1674 ntBASIC15.73■□□□□ 0.11
TIMD4Q96H15 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 AL512353.2-201ENST00000448759 1962 ntBASIC15.73■□□□□ 0.11
TIMD4Q96H15 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMD4Q96H15 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMD4Q96H15 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMD4Q96H15 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMD4Q96H15 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.73■□□□□ 0.11
TIMD4Q96H15 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMD4Q96H15 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMD4Q96H15 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMD4Q96H15 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMD4Q96H15 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMD4Q96H15 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMD4Q96H15 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMD4Q96H15 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMD4Q96H15 AFG3L1P-217ENST00000557444 2447 ntBASIC15.73■□□□□ 0.11
TIMD4Q96H15 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 AL032819.2-201ENST00000624543 2162 ntBASIC15.72■□□□□ 0.11
TIMD4Q96H15 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TIMD4Q96H15 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMD4Q96H15 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TIMD4Q96H15 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.71■□□□□ 0.11
TIMD4Q96H15 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMD4Q96H15 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.71■□□□□ 0.11
TIMD4Q96H15 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMD4Q96H15 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMD4Q96H15 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
TIMD4Q96H15 KRT8P7-201ENST00000533003 1432 ntBASIC15.71■□□□□ 0.11
TIMD4Q96H15 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMD4Q96H15 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.71■□□□□ 0.11
TIMD4Q96H15 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TIMD4Q96H15 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TIMD4Q96H15 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TIMD4Q96H15 GCSHP2-201ENST00000560971 527 ntBASIC15.71■□□□□ 0.11
TIMD4Q96H15 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMD4Q96H15 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.71■□□□□ 0.11
TIMD4Q96H15 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TIMD4Q96H15 AC112497.1-201ENST00000624824 639 ntBASIC15.71■□□□□ 0.11
TIMD4Q96H15 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.71■□□□□ 0.11
TIMD4Q96H15 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMD4Q96H15 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms