Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP13Q92995 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
USP13Q92995 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
USP13Q92995 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP13Q92995 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.58■□□□□ 0.72
USP13Q92995 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
USP13Q92995 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP13Q92995 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP13Q92995 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.58■□□□□ 0.72
USP13Q92995 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
USP13Q92995 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
USP13Q92995 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
USP13Q92995 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP13Q92995 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.58■□□□□ 0.72
USP13Q92995 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP13Q92995 Z82202.1-201ENST00000623446 1880 ntBASIC19.58■□□□□ 0.72
USP13Q92995 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP13Q92995 KRT8P3-201ENST00000519669 1449 ntBASIC19.58■□□□□ 0.72
USP13Q92995 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP13Q92995 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP13Q92995 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP13Q92995 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.57■□□□□ 0.72
USP13Q92995 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP13Q92995 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP13Q92995 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.57■□□□□ 0.72
USP13Q92995 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP13Q92995 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP13Q92995 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.57■□□□□ 0.72
USP13Q92995 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
USP13Q92995 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP13Q92995 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP13Q92995 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP13Q92995 SPDYE13P-201ENST00000445314 798 ntBASIC19.57■□□□□ 0.72
USP13Q92995 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.57■□□□□ 0.72
USP13Q92995 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.57■□□□□ 0.72
USP13Q92995 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.57■□□□□ 0.72
USP13Q92995 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.57■□□□□ 0.72
USP13Q92995 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.57■□□□□ 0.72
USP13Q92995 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP13Q92995 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP13Q92995 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.56■□□□□ 0.72
USP13Q92995 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP13Q92995 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.56■□□□□ 0.72
USP13Q92995 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.56■□□□□ 0.72
USP13Q92995 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP13Q92995 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
USP13Q92995 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP13Q92995 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.56■□□□□ 0.72
USP13Q92995 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
USP13Q92995 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP13Q92995 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP13Q92995 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP13Q92995 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.56■□□□□ 0.72
USP13Q92995 MCCD1P1-208ENST00000445732 328 ntBASIC19.56■□□□□ 0.72
USP13Q92995 RASA4DP-201ENST00000460726 1199 ntBASIC19.56■□□□□ 0.72
USP13Q92995 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
USP13Q92995 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP13Q92995 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
USP13Q92995 AC024243.1-201ENST00000609234 778 ntBASIC19.56■□□□□ 0.72
USP13Q92995 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP13Q92995 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
USP13Q92995 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
USP13Q92995 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.56■□□□□ 0.72
USP13Q92995 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP13Q92995 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.56■□□□□ 0.72
USP13Q92995 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
USP13Q92995 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP13Q92995 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.55■□□□□ 0.72
USP13Q92995 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
USP13Q92995 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP13Q92995 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP13Q92995 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP13Q92995 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.55■□□□□ 0.72
USP13Q92995 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP13Q92995 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP13Q92995 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
USP13Q92995 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
USP13Q92995 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.55■□□□□ 0.72
USP13Q92995 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
USP13Q92995 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
USP13Q92995 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP13Q92995 MIR3180-5-201ENST00000583743 153 ntBASIC19.55■□□□□ 0.72
USP13Q92995 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.55■□□□□ 0.72
USP13Q92995 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP13Q92995 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.55■□□□□ 0.72
USP13Q92995 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
USP13Q92995 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP13Q92995 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP13Q92995 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP13Q92995 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP13Q92995 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP13Q92995 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.54■□□□□ 0.72
USP13Q92995 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP13Q92995 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP13Q92995 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP13Q92995 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP13Q92995 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP13Q92995 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP13Q92995 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP13Q92995 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms