Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 KRT8P8-201ENST00000434750 1448 ntBASIC16.5■□□□□ 0.23
AP3S1Q92572 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S1Q92572 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S1Q92572 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S1Q92572 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3S1Q92572 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S1Q92572 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
AP3S1Q92572 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S1Q92572 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S1Q92572 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
AP3S1Q92572 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
AP3S1Q92572 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
AP3S1Q92572 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
AP3S1Q92572 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3S1Q92572 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.49■□□□□ 0.23
AP3S1Q92572 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
AP3S1Q92572 AC096631.2-201ENST00000436136 790 ntBASIC16.49■□□□□ 0.23
AP3S1Q92572 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.49■□□□□ 0.23
AP3S1Q92572 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.49■□□□□ 0.23
AP3S1Q92572 RARRES2P4-201ENST00000514074 484 ntBASIC16.49■□□□□ 0.23
AP3S1Q92572 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
AP3S1Q92572 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.49■□□□□ 0.23
AP3S1Q92572 AC010536.3-201ENST00000620306 533 ntBASIC16.49■□□□□ 0.23
AP3S1Q92572 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.49■□□□□ 0.23
AP3S1Q92572 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3S1Q92572 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.49■□□□□ 0.23
AP3S1Q92572 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S1Q92572 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
AP3S1Q92572 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3S1Q92572 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
AP3S1Q92572 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.49■□□□□ 0.23
AP3S1Q92572 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3S1Q92572 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3S1Q92572 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.48■□□□□ 0.23
AP3S1Q92572 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
AP3S1Q92572 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
AP3S1Q92572 AC004854.2-201ENST00000608450 1441 ntBASIC16.48■□□□□ 0.23
AP3S1Q92572 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.48■□□□□ 0.23
AP3S1Q92572 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.48■□□□□ 0.23
AP3S1Q92572 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.48■□□□□ 0.23
AP3S1Q92572 AC013268.1-206ENST00000638368 961 ntBASIC16.48■□□□□ 0.23
AP3S1Q92572 AC112229.1-201ENST00000639295 961 ntBASIC16.48■□□□□ 0.23
AP3S1Q92572 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3S1Q92572 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.48■□□□□ 0.23
AP3S1Q92572 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
AP3S1Q92572 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
AP3S1Q92572 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3S1Q92572 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3S1Q92572 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S1Q92572 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3S1Q92572 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.47■□□□□ 0.23
AP3S1Q92572 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
AP3S1Q92572 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
AP3S1Q92572 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
AP3S1Q92572 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
AP3S1Q92572 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
AP3S1Q92572 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.47■□□□□ 0.23
AP3S1Q92572 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 AC084018.2-201ENST00000613093 2607 ntBASIC16.47■□□□□ 0.23
AP3S1Q92572 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms