Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TOPBP1Q92547 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC31.34■■■□□ 2.61
TOPBP1Q92547 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC31.34■■■□□ 2.61
TOPBP1Q92547 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TOPBP1Q92547 GABARAPL3-202ENST00000624044 1851 ntBASIC31.33■■■□□ 2.61
TOPBP1Q92547 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TOPBP1Q92547 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TOPBP1Q92547 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC31.33■■■□□ 2.61
TOPBP1Q92547 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
TOPBP1Q92547 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
TOPBP1Q92547 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TOPBP1Q92547 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC31.33■■■□□ 2.61
TOPBP1Q92547 AC027601.4-201ENST00000611259 610 ntBASIC31.33■■■□□ 2.61
TOPBP1Q92547 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TOPBP1Q92547 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TOPBP1Q92547 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TOPBP1Q92547 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
TOPBP1Q92547 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
TOPBP1Q92547 LINC00565-201ENST00000562710 2331 ntBASIC31.32■■■□□ 2.6
TOPBP1Q92547 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC31.32■■■□□ 2.6
TOPBP1Q92547 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC31.32■■■□□ 2.6
TOPBP1Q92547 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC31.32■■■□□ 2.6
TOPBP1Q92547 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC31.32■■■□□ 2.6
TOPBP1Q92547 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TOPBP1Q92547 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC31.31■■■□□ 2.6
TOPBP1Q92547 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
TOPBP1Q92547 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC31.31■■■□□ 2.6
TOPBP1Q92547 YBX2P1-201ENST00000394192 760 ntBASIC31.31■■■□□ 2.6
TOPBP1Q92547 DDT-203ENST00000403754 569 ntTSL 3 BASIC31.31■■■□□ 2.6
TOPBP1Q92547 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC31.31■■■□□ 2.6
TOPBP1Q92547 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC31.31■■■□□ 2.6
TOPBP1Q92547 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC31.31■■■□□ 2.6
TOPBP1Q92547 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC31.31■■■□□ 2.6
TOPBP1Q92547 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC31.31■■■□□ 2.6
TOPBP1Q92547 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC31.31■■■□□ 2.6
TOPBP1Q92547 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC31.31■■■□□ 2.6
TOPBP1Q92547 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TOPBP1Q92547 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC31.31■■■□□ 2.6
TOPBP1Q92547 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TOPBP1Q92547 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TOPBP1Q92547 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
TOPBP1Q92547 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
TOPBP1Q92547 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
TOPBP1Q92547 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
TOPBP1Q92547 RCN1P2-201ENST00000398357 915 ntBASIC31.3■■■□□ 2.6
TOPBP1Q92547 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC31.3■■■□□ 2.6
TOPBP1Q92547 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC31.3■■■□□ 2.6
TOPBP1Q92547 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TOPBP1Q92547 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TOPBP1Q92547 Z82202.1-201ENST00000623446 1880 ntBASIC31.3■■■□□ 2.6
TOPBP1Q92547 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
TOPBP1Q92547 MED17-221ENST00000639724 2317 ntTSL 5 BASIC31.3■■■□□ 2.6
TOPBP1Q92547 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
TOPBP1Q92547 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TOPBP1Q92547 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TOPBP1Q92547 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC31.29■■■□□ 2.6
TOPBP1Q92547 DDT-206ENST00000430101 573 ntTSL 2 BASIC31.29■■■□□ 2.6
TOPBP1Q92547 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC31.29■■■□□ 2.6
TOPBP1Q92547 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC31.29■■■□□ 2.6
TOPBP1Q92547 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC31.29■■■□□ 2.6
TOPBP1Q92547 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC31.29■■■□□ 2.6
TOPBP1Q92547 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
TOPBP1Q92547 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
TOPBP1Q92547 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TOPBP1Q92547 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TOPBP1Q92547 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC31.29■■■□□ 2.6
TOPBP1Q92547 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
TOPBP1Q92547 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TOPBP1Q92547 MED16-201ENST00000269814 1199 ntTSL 5 BASIC31.29■■■□□ 2.6
TOPBP1Q92547 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TOPBP1Q92547 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TOPBP1Q92547 FIS1-203ENST00000442303 631 ntTSL 3 BASIC31.29■■■□□ 2.6
TOPBP1Q92547 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
TOPBP1Q92547 AC012640.2-201ENST00000561606 901 ntBASIC31.29■■■□□ 2.6
TOPBP1Q92547 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
TOPBP1Q92547 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC31.29■■■□□ 2.6
TOPBP1Q92547 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TOPBP1Q92547 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TOPBP1Q92547 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TOPBP1Q92547 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TOPBP1Q92547 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC31.28■■■□□ 2.6
TOPBP1Q92547 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TOPBP1Q92547 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TOPBP1Q92547 AL591424.1-201ENST00000442569 1213 ntBASIC31.28■■■□□ 2.6
TOPBP1Q92547 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC31.28■■■□□ 2.6
TOPBP1Q92547 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC31.28■■■□□ 2.6
TOPBP1Q92547 AC021087.4-201ENST00000563761 564 ntBASIC31.28■■■□□ 2.6
TOPBP1Q92547 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC31.28■■■□□ 2.6
TOPBP1Q92547 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
TOPBP1Q92547 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TOPBP1Q92547 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TOPBP1Q92547 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC31.27■■■□□ 2.6
TOPBP1Q92547 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
TOPBP1Q92547 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
TOPBP1Q92547 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
TOPBP1Q92547 IMP4-203ENST00000409935 958 ntTSL 5 BASIC31.27■■■□□ 2.6
TOPBP1Q92547 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC31.27■■■□□ 2.6
TOPBP1Q92547 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC31.27■■■□□ 2.6
TOPBP1Q92547 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
TOPBP1Q92547 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC31.27■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms