Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 AC023824.1-201ENST00000562945 2975 ntBASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 AC120024.1-201ENST00000562672 995 ntBASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 TMEM179-206ENST00000616017 1645 ntBASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC10.28□□□□□ -0.76
SPTSSBQ8NFR3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC10.27□□□□□ -0.76
SPTSSBQ8NFR3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SPTSSBQ8NFR3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
SPTSSBQ8NFR3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
SPTSSBQ8NFR3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC10.27□□□□□ -0.76
SPTSSBQ8NFR3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC10.27□□□□□ -0.76
SPTSSBQ8NFR3 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
SPTSSBQ8NFR3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC10.27□□□□□ -0.76
SPTSSBQ8NFR3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms