Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 AC005829.2-201ENST00000571422 1056 ntBASIC18.17■□□□□ 0.5
HIPK4Q8NE63 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK4Q8NE63 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 ESPNP-201ENST00000270691 2015 ntBASIC18.16■□□□□ 0.5
HIPK4Q8NE63 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 AL050303.2-201ENST00000619798 666 ntBASIC18.16■□□□□ 0.5
HIPK4Q8NE63 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HIPK4Q8NE63 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 AC009053.2-201ENST00000563701 2365 ntBASIC18.15■□□□□ 0.5
HIPK4Q8NE63 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.15■□□□□ 0.5
HIPK4Q8NE63 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HIPK4Q8NE63 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.14■□□□□ 0.5
HIPK4Q8NE63 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HIPK4Q8NE63 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
HIPK4Q8NE63 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
HIPK4Q8NE63 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
HIPK4Q8NE63 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms