Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 RCC2P3-201ENST00000418112 1537 ntBASIC16.37■□□□□ 0.21
CPEB3Q8NE35 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.37■□□□□ 0.21
CPEB3Q8NE35 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 AL353719.1-201ENST00000566847 864 ntBASIC16.37■□□□□ 0.21
CPEB3Q8NE35 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPEB3Q8NE35 GPAT2P1-201ENST00000444924 1672 ntBASIC16.37■□□□□ 0.21
CPEB3Q8NE35 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 AL031598.1-201ENST00000561511 1773 ntBASIC16.36■□□□□ 0.21
CPEB3Q8NE35 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 AC093525.10-201ENST00000625130 1569 ntBASIC16.36■□□□□ 0.21
CPEB3Q8NE35 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 TSPY14P-201ENST00000303979 915 ntBASIC16.36■□□□□ 0.21
CPEB3Q8NE35 INGX-201ENST00000359239 846 ntBASIC16.36■□□□□ 0.21
CPEB3Q8NE35 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 TSPY17P-201ENST00000450329 467 ntBASIC16.36■□□□□ 0.21
CPEB3Q8NE35 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 NAPSB-206ENST00000562112 1266 ntBASIC16.36■□□□□ 0.21
CPEB3Q8NE35 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.36■□□□□ 0.21
CPEB3Q8NE35 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.36■□□□□ 0.21
CPEB3Q8NE35 AC092338.2-201ENST00000568827 1415 ntBASIC16.36■□□□□ 0.21
CPEB3Q8NE35 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 AL023284.2-201ENST00000405850 579 ntBASIC16.35■□□□□ 0.21
CPEB3Q8NE35 AC087499.1-201ENST00000418141 1075 ntBASIC16.35■□□□□ 0.21
CPEB3Q8NE35 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 AC007663.1-201ENST00000438948 1240 ntBASIC16.35■□□□□ 0.21
CPEB3Q8NE35 CCR12P-201ENST00000446203 998 ntBASIC16.35■□□□□ 0.21
CPEB3Q8NE35 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 AP003041.3-201ENST00000527151 707 ntBASIC16.35■□□□□ 0.21
CPEB3Q8NE35 EGLN1P1-201ENST00000531623 762 ntBASIC16.35■□□□□ 0.21
CPEB3Q8NE35 AC116562.4-202ENST00000641738 218 ntBASIC16.35■□□□□ 0.21
CPEB3Q8NE35 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms