Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 KRT18P1-202ENST00000452408 1331 ntBASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 AFG3L1P-217ENST00000557444 2447 ntBASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.88■□□□□ 0.45
ZNF248Q8NDW4 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 AC104692.2-201ENST00000603054 253 ntBASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 AC093525.10-201ENST00000625130 1569 ntBASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.87■□□□□ 0.45
ZNF248Q8NDW4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 AL732292.2-201ENST00000609649 430 ntBASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 AL162741.1-201ENST00000565563 1558 ntBASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF248Q8NDW4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 AL662844.1-201ENST00000546340 181 ntBASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF248Q8NDW4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms