Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNRC6AQ8NDV7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNRC6AQ8NDV7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.04■□□□□ 0.32
TNRC6AQ8NDV7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TNRC6AQ8NDV7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.04■□□□□ 0.32
TNRC6AQ8NDV7 AL592071.1-201ENST00000611956 408 ntBASIC17.04■□□□□ 0.32
TNRC6AQ8NDV7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.04■□□□□ 0.32
TNRC6AQ8NDV7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.04■□□□□ 0.32
TNRC6AQ8NDV7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 AC079776.4-201ENST00000511039 504 ntBASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 AL121912.1-201ENST00000603683 238 ntBASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 AC124864.1-201ENST00000623408 392 ntBASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.03■□□□□ 0.32
TNRC6AQ8NDV7 RNA5SP419-201ENST00000515908 135 ntBASIC17.02■□□□□ 0.32
TNRC6AQ8NDV7 AL390719.2-201ENST00000606993 987 ntBASIC17.02■□□□□ 0.32
TNRC6AQ8NDV7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.02■□□□□ 0.32
TNRC6AQ8NDV7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.02■□□□□ 0.32
TNRC6AQ8NDV7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.02■□□□□ 0.32
TNRC6AQ8NDV7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
TNRC6AQ8NDV7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNRC6AQ8NDV7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.02■□□□□ 0.32
TNRC6AQ8NDV7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNRC6AQ8NDV7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNRC6AQ8NDV7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.02■□□□□ 0.31
TNRC6AQ8NDV7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
TNRC6AQ8NDV7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.31
TNRC6AQ8NDV7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.02■□□□□ 0.31
TNRC6AQ8NDV7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNRC6AQ8NDV7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNRC6AQ8NDV7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 AC091304.2-201ENST00000564639 760 ntBASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 AP005901.3-202ENST00000581653 237 ntBASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 Z69720.1-201ENST00000601483 472 ntBASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.01■□□□□ 0.31
TNRC6AQ8NDV7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 AP003733.1-201ENST00000491725 852 ntBASIC17■□□□□ 0.31
TNRC6AQ8NDV7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 AF238378.1-201ENST00000526806 358 ntBASIC17■□□□□ 0.31
TNRC6AQ8NDV7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 AL121772.3-201ENST00000610840 674 ntBASIC17■□□□□ 0.31
TNRC6AQ8NDV7 GPALPP1-207ENST00000611650 899 ntBASIC17■□□□□ 0.31
TNRC6AQ8NDV7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 NSUN5P1-202ENST00000421140 1535 ntBASIC17■□□□□ 0.31
TNRC6AQ8NDV7 NSUN5P2-203ENST00000457352 1529 ntBASIC17■□□□□ 0.31
TNRC6AQ8NDV7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17■□□□□ 0.31
TNRC6AQ8NDV7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms