Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00311Q8N616 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LINC00311Q8N616 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00311Q8N616 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00311Q8N616 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00311Q8N616 HOXB1-202ENST00000577092 1414 ntBASIC15.17■□□□□ 0.02
LINC00311Q8N616 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
LINC00311Q8N616 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
LINC00311Q8N616 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00311Q8N616 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00311Q8N616 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00311Q8N616 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LINC00311Q8N616 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LINC00311Q8N616 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LINC00311Q8N616 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00311Q8N616 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00311Q8N616 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00311Q8N616 CR769767.2-201ENST00000622735 460 ntBASIC15.16■□□□□ 0.02
LINC00311Q8N616 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00311Q8N616 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LINC00311Q8N616 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00311Q8N616 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00311Q8N616 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00311Q8N616 AC005082.1-201ENST00000413042 2259 ntBASIC15.15■□□□□ 0.02
LINC00311Q8N616 MYLKP1-201ENST00000509077 1580 ntBASIC15.15■□□□□ 0.02
LINC00311Q8N616 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LINC00311Q8N616 CYP2D8P-201ENST00000433633 1490 ntBASIC15.15■□□□□ 0.02
LINC00311Q8N616 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
LINC00311Q8N616 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00311Q8N616 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00311Q8N616 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00311Q8N616 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00311Q8N616 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00311Q8N616 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00311Q8N616 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00311Q8N616 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00311Q8N616 AL512604.3-201ENST00000569583 964 ntBASIC15.15■□□□□ 0.02
LINC00311Q8N616 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC00311Q8N616 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
LINC00311Q8N616 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00311Q8N616 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00311Q8N616 KRT8P9-201ENST00000558927 1449 ntBASIC15.15■□□□□ 0.02
LINC00311Q8N616 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00311Q8N616 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00311Q8N616 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00311Q8N616 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00311Q8N616 AC036111.1-201ENST00000533973 1582 ntBASIC15.15■□□□□ 0.02
LINC00311Q8N616 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00311Q8N616 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LINC00311Q8N616 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00311Q8N616 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 AL499627.1-201ENST00000569373 2188 ntBASIC15.14■□□□□ 0.01
LINC00311Q8N616 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms